Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm15274-201ENSMUST00000131442 291 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm21979-201ENSMUST00000139887 291 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm9498-201ENSMUST00000140849 291 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14368-201ENSMUST00000145305 415 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm15259-201ENSMUST00000151262 291 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm15279-201ENSMUST00000155593 288 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm26487-201ENSMUST00000158022 94 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm25247-201ENSMUST00000175475 90 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm25194-201ENSMUST00000177987 79 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm44088-201ENSMUST00000204595 237 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Mir421-201ENSMUST00000083575 76 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23130-201ENSMUST00000104252 74 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm13603-201ENSMUST00000119404 83 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14946-201ENSMUST00000119859 296 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14898-201ENSMUST00000120202 645 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm24594-201ENSMUST00000122502 99 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm25294-201ENSMUST00000122791 104 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm22038-201ENSMUST00000157277 242 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm25952-201ENSMUST00000175329 74 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm27676-201ENSMUST00000183669 61 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Mir6355-201ENSMUST00000183687 106 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm29022-201ENSMUST00000190702 225 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm37709-201ENSMUST00000195074 600 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm44609-201ENSMUST00000207157 460 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Snord95-201ENSMUST00000082846 68 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Gm25650-201ENSMUST00000083784 162 ntBASIC0.04□□□□□ -2.4
Trav6d-4Q5R1I0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm15175-201ENSMUST00000117629 132 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23641-201ENSMUST00000157857 101 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm18396-201ENSMUST00000177095 361 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm26177-201ENSMUST00000178683 107 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm42958-201ENSMUST00000197595 318 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm5955-201ENSMUST00000222712 219 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav6d-4Q5R1I0 Gm24833-201ENSMUST00000116775 120 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm24836-201ENSMUST00000122609 108 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm23331-201ENSMUST00000157423 108 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm22340-201ENSMUST00000157717 114 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm27342-201ENSMUST00000183530 109 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm44449-201ENSMUST00000203610 153 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm44554-201ENSMUST00000208738 147 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm19855-201ENSMUST00000210145 249 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm24610-201ENSMUST00000083270 109 ntBASIC0.02□□□□□ -2.41
Trav6d-4Q5R1I0 Gm22193-201ENSMUST00000116868 76 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm26278-201ENSMUST00000157098 132 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm25375-201ENSMUST00000158157 135 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm22088-201ENSMUST00000158341 117 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm27715-201ENSMUST00000184714 260 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm29216-201ENSMUST00000187117 492 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm34073-201ENSMUST00000195736 212 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm23058-201ENSMUST00000093703 107 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm8858-201ENSMUST00000118259 342 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Gm23538-201ENSMUST00000157535 101 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Gm15914-201ENSMUST00000161922 309 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Gm43513-201ENSMUST00000199779 1076 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Gm44125-201ENSMUST00000203068 448 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 AC122834.1-201ENSMUST00000227182 425 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 AC133654.1-201ENSMUST00000228411 672 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Mir32-201ENSMUST00000083610 70 ntBASIC0□□□□□ -2.41
Trav6d-4Q5R1I0 Gm42755-201ENSMUST00000198533 1493 ntBASIC-0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm25491-201ENSMUST00000158733 308 ntBASIC-0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-0.01□□□□□ -2.41
Trav6d-4Q5R1I0 Gm28257-201ENSMUST00000185244 463 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms