Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Mir7241-201ENSMUST00000184532 64 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Mir6985-201ENSMUST00000184641 61 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm19901-201ENSMUST00000192191 495 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm44387-201ENSMUST00000196298 145 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm44384-201ENSMUST00000200208 114 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm44726-201ENSMUST00000203427 217 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Mir344-201ENSMUST00000083634 95 ntBASIC1.36□□□□□ -2.19
Trav8d-2Q5R1B6 Mir223-201ENSMUST00000102112 110 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm11891-201ENSMUST00000121241 619 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm12770-201ENSMUST00000121734 462 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm25543-201ENSMUST00000122678 312 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm26150-201ENSMUST00000157426 151 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm25044-201ENSMUST00000158603 104 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm26029-201ENSMUST00000158659 132 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm16038-201ENSMUST00000159317 193 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Mir1291-201ENSMUST00000199842 117 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm42506-201ENSMUST00000202009 150 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm45815-201ENSMUST00000220241 146 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Snora34-201ENSMUST00000083402 138 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gm25207-201ENSMUST00000093745 107 ntBASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Trav8d-2Q5R1B6 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Mir374b-201ENSMUST00000102314 95 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm25496-201ENSMUST00000104430 120 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm15443-201ENSMUST00000118947 820 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm22221-201ENSMUST00000157362 103 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm22075-201ENSMUST00000158599 192 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm22136-201ENSMUST00000158751 268 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm22263-201ENSMUST00000180060 104 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm27248-201ENSMUST00000184004 166 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm36891-201ENSMUST00000191995 655 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm45403-201ENSMUST00000209453 276 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm45456-201ENSMUST00000210841 243 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm18188-201ENSMUST00000219386 478 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.34□□□□□ -2.19
Trav8d-2Q5R1B6 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
Trav8d-2Q5R1B6 Gm23015-201ENSMUST00000104145 128 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm14269-201ENSMUST00000120455 306 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24630-201ENSMUST00000122768 106 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm17148-201ENSMUST00000164702 249 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24085-201ENSMUST00000175172 116 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm42834-201ENSMUST00000196845 256 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm45907-201ENSMUST00000213023 193 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24615-201ENSMUST00000083268 113 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Mir196b-201ENSMUST00000083509 85 ntBASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Snord98-201ENSMUST00000116819 65 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm22386-201ENSMUST00000158192 129 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm25768-201ENSMUST00000158570 98 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm22565-201ENSMUST00000175540 69 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm25314-201ENSMUST00000178810 79 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm27271-201ENSMUST00000183509 170 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm28848-201ENSMUST00000189984 168 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm7495-201ENSMUST00000215099 426 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24536-201ENSMUST00000083144 107 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Gm26314-201ENSMUST00000083891 107 ntBASIC1.32□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm11522-201ENSMUST00000120533 176 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm22082-201ENSMUST00000157587 161 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm24851-201ENSMUST00000158028 103 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm23854-201ENSMUST00000158378 108 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm23016-201ENSMUST00000158431 62 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm29005-201ENSMUST00000186773 320 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm37128-201ENSMUST00000192599 232 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Gm44458-201ENSMUST00000196594 143 ntBASIC1.31□□□□□ -2.2
Trav8d-2Q5R1B6 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms