Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rnf180Q3U827 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm12797-201ENSMUST00000118645 273 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm27396-201ENSMUST00000157708 58 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm24846-201ENSMUST00000158033 108 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm23219-201ENSMUST00000158123 87 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm22537-201ENSMUST00000158172 199 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm24878-201ENSMUST00000158782 104 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Mir6925-201ENSMUST00000197857 70 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm44429-201ENSMUST00000203542 186 ntBASIC3.29□□□□□ -1.88
Rnf180Q3U827 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Rnf180Q3U827 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Rnf180Q3U827 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rnf180Q3U827 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Rnf180Q3U827 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Rnf180Q3U827 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm24121-201ENSMUST00000102029 106 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm11285-201ENSMUST00000118443 322 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm24006-201ENSMUST00000158462 132 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gm29014-201ENSMUST00000191422 326 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Rnf180Q3U827 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.28□□□□□ -1.88
Rnf180Q3U827 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm24670-201ENSMUST00000104154 132 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm15272-201ENSMUST00000120865 233 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm22215-201ENSMUST00000157558 96 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm23476-201ENSMUST00000158881 274 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm23002-201ENSMUST00000179221 107 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Mir3068-202ENSMUST00000197755 79 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm20734-201ENSMUST00000216939 193 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm23462-201ENSMUST00000083264 104 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm23247-201ENSMUST00000083373 107 ntBASIC3.27□□□□□ -1.89
Rnf180Q3U827 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Rnf180Q3U827 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm23202-201ENSMUST00000104376 129 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm15497-201ENSMUST00000119137 551 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm23589-201ENSMUST00000157660 105 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm22853-201ENSMUST00000174974 131 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm28002-201ENSMUST00000184832 100 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm27540-201ENSMUST00000184950 187 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.26□□□□□ -1.89
Rnf180Q3U827 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Rnf180Q3U827 Gm25930-201ENSMUST00000082785 107 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.26□□□□□ -1.89
Rnf180Q3U827 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Rnf180Q3U827 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm26077-201ENSMUST00000104064 123 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm24126-201ENSMUST00000104111 106 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm25390-201ENSMUST00000157341 103 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm25720-201ENSMUST00000157503 105 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm24213-201ENSMUST00000158255 258 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm26004-201ENSMUST00000158804 116 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.25□□□□□ -1.89
Rnf180Q3U827 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Rnf180Q3U827 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.25□□□□□ -1.89
Rnf180Q3U827 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Rnf180Q3U827 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm25068-201ENSMUST00000103895 110 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm6897-201ENSMUST00000117714 138 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm14758-201ENSMUST00000119104 138 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm14922-201ENSMUST00000121131 163 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm28020-201ENSMUST00000157739 67 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm25654-201ENSMUST00000158467 88 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm7592-201ENSMUST00000160674 627 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm22192-201ENSMUST00000175128 85 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm29022-201ENSMUST00000190702 225 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm25632-201ENSMUST00000083112 85 ntBASIC3.24□□□□□ -1.89
Rnf180Q3U827 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Rnf180Q3U827 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms