Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.91□□□□□ -1.78
Col17a1Q07563 Gm7582-201ENSMUST00000160831 603 ntBASIC3.91□□□□□ -1.78
Col17a1Q07563 Snord80-202ENSMUST00000199023 77 ntBASIC3.91□□□□□ -1.78
Col17a1Q07563 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.91□□□□□ -1.78
Col17a1Q07563 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.91□□□□□ -1.78
Col17a1Q07563 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm23256-201ENSMUST00000102235 110 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm25832-201ENSMUST00000104140 130 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm25170-201ENSMUST00000104191 129 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm16242-201ENSMUST00000117741 334 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm22027-201ENSMUST00000122737 127 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm25883-201ENSMUST00000157781 271 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm22113-201ENSMUST00000158343 104 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm25457-201ENSMUST00000179509 107 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm37692-201ENSMUST00000192633 232 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm25755-201ENSMUST00000083396 107 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col17a1Q07563 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.9□□□□□ -1.79
Col17a1Q07563 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col17a1Q07563 Gm15244-201ENSMUST00000121122 130 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm11334-201ENSMUST00000121969 156 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm14770-201ENSMUST00000122197 312 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm17119-201ENSMUST00000163943 280 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm23967-201ENSMUST00000175062 78 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm23355-201ENSMUST00000177614 107 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm23148-201ENSMUST00000180367 107 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm27786-201ENSMUST00000184337 70 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm29022-201ENSMUST00000190702 225 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm43284-201ENSMUST00000200103 253 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm44960-201ENSMUST00000207403 141 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 Gm18991-201ENSMUST00000209225 746 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.89□□□□□ -1.79
Col17a1Q07563 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col17a1Q07563 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm24096-201ENSMUST00000103905 110 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm14748-201ENSMUST00000119819 411 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm22349-201ENSMUST00000157864 107 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm17186-201ENSMUST00000171742 456 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm22699-201ENSMUST00000175376 105 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm27668-201ENSMUST00000184188 120 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm29603-201ENSMUST00000186792 334 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm37713-201ENSMUST00000191746 198 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col17a1Q07563 Gm26500-201ENSMUST00000101867 106 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Gm22033-201ENSMUST00000116947 90 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Gm24876-201ENSMUST00000158780 92 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Gm28155-201ENSMUST00000191066 151 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Gm19901-201ENSMUST00000192191 495 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Gm22685-201ENSMUST00000082848 106 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col17a1Q07563 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.87□□□□□ -1.79
Col17a1Q07563 Mir450b-201ENSMUST00000102095 82 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm11204-201ENSMUST00000122438 147 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm23640-201ENSMUST00000157860 104 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm22315-201ENSMUST00000158010 143 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm23267-201ENSMUST00000178490 132 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm45315-201ENSMUST00000209283 333 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm18502-201ENSMUST00000218679 199 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.86□□□□□ -1.79
Col17a1Q07563 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Col17a1Q07563 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm22767-201ENSMUST00000158365 165 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm6615-201ENSMUST00000199426 631 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Gm42960-201ENSMUST00000202160 241 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Mir32-201ENSMUST00000083610 70 ntBASIC3.86□□□□□ -1.79
Col17a1Q07563 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm13457-201ENSMUST00000117885 267 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm22553-201ENSMUST00000157797 295 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm22966-201ENSMUST00000157957 129 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm6003-201ENSMUST00000187903 463 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm45101-201ENSMUST00000208327 232 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col17a1Q07563 Gm26066-201ENSMUST00000083385 109 ntBASIC3.85□□□□□ -1.79
Col17a1Q07563 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col17a1Q07563 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col17a1Q07563 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col17a1Q07563 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Col17a1Q07563 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Col17a1Q07563 Gm26147-201ENSMUST00000104479 114 ntBASIC3.84□□□□□ -1.8
Col17a1Q07563 Gm22321-201ENSMUST00000157152 104 ntBASIC3.84□□□□□ -1.8
Col17a1Q07563 Gm22845-201ENSMUST00000157712 104 ntBASIC3.84□□□□□ -1.8
Col17a1Q07563 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.84□□□□□ -1.8
Col17a1Q07563 Gm44208-201ENSMUST00000205199 421 ntBASIC3.84□□□□□ -1.8
Col17a1Q07563 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 175.9 ms