Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Mir137-201ENSMUST00000083635 73 ntBASIC3.56□□□□□ -1.84
Col6a1Q04857 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a1Q04857 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm24582-201ENSMUST00000103967 103 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm24440-201ENSMUST00000157236 63 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm22967-201ENSMUST00000157956 239 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm24213-201ENSMUST00000158255 258 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm7592-201ENSMUST00000160674 627 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm24512-201ENSMUST00000174963 65 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm22775-201ENSMUST00000177630 120 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm23569-201ENSMUST00000180120 120 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm34139-201ENSMUST00000196166 294 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm42834-201ENSMUST00000196845 256 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm22248-201ENSMUST00000082482 150 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm22979-201ENSMUST00000082609 159 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm25142-201ENSMUST00000082698 107 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm22443-201ENSMUST00000082890 107 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm23727-201ENSMUST00000083352 164 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm10212-201ENSMUST00000087884 324 ntBASIC3.55□□□□□ -1.84
Col6a1Q04857 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a1Q04857 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
Col6a1Q04857 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a1Q04857 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a1Q04857 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a1Q04857 Gm15861-201ENSMUST00000120979 339 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 Gm11334-201ENSMUST00000121969 156 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 Gm23592-201ENSMUST00000157859 117 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.54□□□□□ -1.84
Col6a1Q04857 Gm17161-201ENSMUST00000169187 524 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.54□□□□□ -1.84
Col6a1Q04857 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 Gm22978-201ENSMUST00000082607 160 ntBASIC3.54□□□□□ -1.84
Col6a1Q04857 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a1Q04857 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.54□□□□□ -1.84
Col6a1Q04857 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Snord89-201ENSMUST00000104516 110 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm13801-201ENSMUST00000120750 160 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm23183-201ENSMUST00000122595 323 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm26477-201ENSMUST00000122617 323 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm24141-201ENSMUST00000122776 115 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm27698-201ENSMUST00000184060 249 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm27505-201ENSMUST00000185071 110 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Gm29553-201ENSMUST00000189692 279 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.53□□□□□ -1.84
Col6a1Q04857 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.53□□□□□ -1.84
Col6a1Q04857 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a1Q04857 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
Col6a1Q04857 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Col6a1Q04857 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col6a1Q04857 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm24283-201ENSMUST00000104233 107 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm6952-201ENSMUST00000118629 159 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm22187-201ENSMUST00000157819 129 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm26482-201ENSMUST00000158015 62 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm24056-201ENSMUST00000158617 146 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm24681-201ENSMUST00000158760 107 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Col6a1Q04857 Mir7068-201ENSMUST00000183439 74 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm18486-201ENSMUST00000184040 298 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm27893-201ENSMUST00000184408 194 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.52□□□□□ -1.85
Col6a1Q04857 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.52□□□□□ -1.85
Col6a1Q04857 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col6a1Q04857 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm12143-201ENSMUST00000119666 332 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm22477-201ENSMUST00000122569 316 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm22560-201ENSMUST00000157332 120 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm23671-201ENSMUST00000157472 103 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm22553-201ENSMUST00000157797 295 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm22664-201ENSMUST00000158719 105 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm17117-201ENSMUST00000163665 299 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm26265-202ENSMUST00000196326 133 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gm43899-201ENSMUST00000203675 246 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Mir488-201ENSMUST00000093595 109 ntBASIC3.51□□□□□ -1.85
Col6a1Q04857 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col6a1Q04857 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a1Q04857 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a1Q04857 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a1Q04857 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm25485-201ENSMUST00000104120 132 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm14626-201ENSMUST00000117619 216 ntBASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.5□□□□□ -1.85
Col6a1Q04857 Gm24601-201ENSMUST00000157970 143 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms