Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1□□□□□ -2.25
Nkx3-1P97436 Gm25801-201ENSMUST00000082638 106 ntBASIC1□□□□□ -2.25
Nkx3-1P97436 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1□□□□□ -2.25
Nkx3-1P97436 Gm26175-201ENSMUST00000083794 131 ntBASIC1□□□□□ -2.25
Nkx3-1P97436 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1□□□□□ -2.25
Nkx3-1P97436 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm22834-201ENSMUST00000102021 79 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Mir653-201ENSMUST00000102402 85 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm25759-201ENSMUST00000103988 129 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm22328-201ENSMUST00000158074 112 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm24393-201ENSMUST00000158135 97 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm22841-201ENSMUST00000158443 62 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm22944-201ENSMUST00000158662 133 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm22308-201ENSMUST00000177609 107 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm26430-201ENSMUST00000178054 107 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm35736-201ENSMUST00000203681 313 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm45403-201ENSMUST00000209453 276 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
Nkx3-1P97436 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm22980-201ENSMUST00000082608 70 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Snora3-201ENSMUST00000083082 132 ntBASIC0.99□□□□□ -2.25
Nkx3-1P97436 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
Nkx3-1P97436 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Nkx3-1P97436 Gm14293-201ENSMUST00000118528 577 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm25543-201ENSMUST00000122678 312 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm23535-201ENSMUST00000157542 106 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm23589-201ENSMUST00000157660 105 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm24419-201ENSMUST00000157875 332 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm25486-201ENSMUST00000158726 63 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm24677-201ENSMUST00000158755 150 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm3027-201ENSMUST00000167579 451 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm20477-201ENSMUST00000174028 280 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm20438-201ENSMUST00000174441 329 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Mir6341-201ENSMUST00000183490 121 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Mir7663-201ENSMUST00000183950 61 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Mir6394-201ENSMUST00000184738 99 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm18357-201ENSMUST00000188184 580 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm38395-201ENSMUST00000199904 830 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Nkx3-1P97436 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Gm26314-201ENSMUST00000083891 107 ntBASIC0.98□□□□□ -2.25
Nkx3-1P97436 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
Nkx3-1P97436 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.97□□□□□ -2.25
Nkx3-1P97436 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.97□□□□□ -2.25
Nkx3-1P97436 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm13672-201ENSMUST00000117554 459 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm14392-201ENSMUST00000120332 401 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm11891-201ENSMUST00000121241 619 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm14413-201ENSMUST00000122158 408 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm25054-201ENSMUST00000157370 97 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm22654-201ENSMUST00000157874 105 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm25333-201ENSMUST00000158035 246 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm23858-201ENSMUST00000158384 106 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm26180-201ENSMUST00000179942 107 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Mir195b-201ENSMUST00000184814 97 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm23731-201ENSMUST00000083749 107 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Nkx3-1P97436 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.97□□□□□ -2.25
Nkx3-1P97436 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm26500-201ENSMUST00000101867 106 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm23705-201ENSMUST00000104370 130 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm22193-201ENSMUST00000116868 76 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm14355-201ENSMUST00000117352 264 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm15899-201ENSMUST00000128586 238 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm24409-201ENSMUST00000157881 152 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm24726-201ENSMUST00000158232 121 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm22768-201ENSMUST00000158366 153 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Mir3057-201ENSMUST00000175040 91 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm25069-201ENSMUST00000175238 86 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Mir28b-201ENSMUST00000175399 80 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm25314-201ENSMUST00000178810 79 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC0.96□□□□□ -2.26
Nkx3-1P97436 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm44337-201ENSMUST00000196553 114 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm5034-201ENSMUST00000199115 634 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Mir1291-201ENSMUST00000199842 117 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm42506-201ENSMUST00000202009 150 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm43914-201ENSMUST00000203592 594 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm20102-201ENSMUST00000222445 220 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm22299-201ENSMUST00000082663 136 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm23245-201ENSMUST00000083370 135 ntBASIC0.96□□□□□ -2.26
Nkx3-1P97436 Gm25579-201ENSMUST00000083407 106 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms