Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24835-201ENSMUST00000116777 111 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm12235-201ENSMUST00000118596 170 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm22565-201ENSMUST00000175540 69 ntBASIC2.21□□□□□ -2.06
NcanP55066 Mir1954-201ENSMUST00000175595 86 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm26092-201ENSMUST00000179798 97 ntBASIC2.21□□□□□ -2.06
NcanP55066 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm27410-201ENSMUST00000183851 115 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm27761-201ENSMUST00000184091 131 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm28169-201ENSMUST00000190342 345 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.21□□□□□ -2.06
NcanP55066 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.21□□□□□ -2.06
NcanP55066 Gm9318-201ENSMUST00000222444 438 ntBASIC2.21□□□□□ -2.06
NcanP55066 Mir423-201ENSMUST00000083584 109 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm23851-201ENSMUST00000083831 103 ntBASIC2.21□□□□□ -2.06
NcanP55066 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.21□□□□□ -2.06
NcanP55066 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NcanP55066 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
NcanP55066 Gm6956-201ENSMUST00000134724 546 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm22843-201ENSMUST00000157710 134 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm23779-201ENSMUST00000157938 64 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm22093-201ENSMUST00000158980 111 ntBASIC2.2□□□□□ -2.06
NcanP55066 Mir6355-201ENSMUST00000183687 106 ntBASIC2.2□□□□□ -2.06
NcanP55066 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm43626-201ENSMUST00000198575 162 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm44654-201ENSMUST00000208052 329 ntBASIC2.2□□□□□ -2.06
NcanP55066 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm23412-201ENSMUST00000083017 107 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm23453-201ENSMUST00000083326 106 ntBASIC2.2□□□□□ -2.06
NcanP55066 Gm23040-201ENSMUST00000083869 163 ntBASIC2.2□□□□□ -2.06
NcanP55066 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
NcanP55066 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NcanP55066 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.2□□□□□ -2.06
NcanP55066 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.19□□□□□ -2.06
NcanP55066 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm25111-201ENSMUST00000116686 147 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm13711-201ENSMUST00000119708 453 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm12924-201ENSMUST00000121747 318 ntBASIC2.19□□□□□ -2.06
NcanP55066 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NcanP55066 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.19□□□□□ -2.06
NcanP55066 Gm22113-201ENSMUST00000158343 104 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm24005-201ENSMUST00000158459 296 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm23579-201ENSMUST00000158528 103 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm8292-201ENSMUST00000162574 396 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm22263-201ENSMUST00000180060 104 ntBASIC2.19□□□□□ -2.06
NcanP55066 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm44337-201ENSMUST00000196553 114 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm44858-201ENSMUST00000207360 154 ntBASIC2.19□□□□□ -2.06
NcanP55066 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm25937-201ENSMUST00000083912 107 ntBASIC2.19□□□□□ -2.06
NcanP55066 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.19□□□□□ -2.06
NcanP55066 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NcanP55066 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NcanP55066 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.19□□□□□ -2.06
NcanP55066 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NcanP55066 Gm14883-201ENSMUST00000120179 157 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm16358-201ENSMUST00000146046 210 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm26105-201ENSMUST00000157253 190 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm23223-201ENSMUST00000158119 127 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm24677-201ENSMUST00000158755 150 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm32033-201ENSMUST00000193483 339 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm42570-201ENSMUST00000195937 292 ntBASIC2.18□□□□□ -2.06
NcanP55066 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.18□□□□□ -2.06
NcanP55066 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.18□□□□□ -2.06
NcanP55066 Gm44794-201ENSMUST00000206550 411 ntBASIC2.18□□□□□ -2.06
NcanP55066 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.18□□□□□ -2.06
NcanP55066 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.18□□□□□ -2.06
NcanP55066 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NcanP55066 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.18□□□□□ -2.06
NcanP55066 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
NcanP55066 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NcanP55066 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NcanP55066 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NcanP55066 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
NcanP55066 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
NcanP55066 Gm24282-201ENSMUST00000104232 66 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm14652-201ENSMUST00000118479 235 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm14001-201ENSMUST00000118847 247 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm6829-201ENSMUST00000119858 360 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm23214-201ENSMUST00000122716 157 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm24902-201ENSMUST00000158126 123 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm24769-201ENSMUST00000158506 129 ntBASIC2.17□□□□□ -2.06
NcanP55066 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NcanP55066 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm20257-202ENSMUST00000188643 130 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm44462-201ENSMUST00000199696 129 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm44989-201ENSMUST00000204749 217 ntBASIC2.17□□□□□ -2.06
NcanP55066 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.17□□□□□ -2.06
NcanP55066 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
NcanP55066 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.17□□□□□ -2.06
NcanP55066 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.17□□□□□ -2.06
NcanP55066 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.16□□□□□ -2.06
NcanP55066 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm11904-201ENSMUST00000120562 248 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm25269-201ENSMUST00000122601 104 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm23120-201ENSMUST00000157654 287 ntBASIC2.16□□□□□ -2.06
NcanP55066 Gm26400-201ENSMUST00000175012 85 ntBASIC2.16□□□□□ -2.06
NcanP55066 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms