Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm24213-201ENSMUST00000158255 258 ntBASIC3.44□□□□□ -1.86
Sox1P53783 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sox1P53783 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.44□□□□□ -1.86
Sox1P53783 Gm43676-201ENSMUST00000197532 540 ntBASIC3.44□□□□□ -1.86
Sox1P53783 Gm25820-201ENSMUST00000198589 127 ntBASIC3.44□□□□□ -1.86
Sox1P53783 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Sox1P53783 Gm45492-201ENSMUST00000211611 288 ntBASIC3.44□□□□□ -1.86
Sox1P53783 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.44□□□□□ -1.86
Sox1P53783 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.44□□□□□ -1.86
Sox1P53783 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.44□□□□□ -1.86
Sox1P53783 Gm23723-201ENSMUST00000082996 132 ntBASIC3.44□□□□□ -1.86
Sox1P53783 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sox1P53783 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sox1P53783 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sox1P53783 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sox1P53783 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sox1P53783 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sox1P53783 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm22477-201ENSMUST00000122569 316 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm23655-201ENSMUST00000122627 105 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm23886-201ENSMUST00000122684 313 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm22988-201ENSMUST00000122759 144 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm26049-201ENSMUST00000157313 108 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm23933-201ENSMUST00000178405 79 ntBASIC3.43□□□□□ -1.86
Sox1P53783 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.43□□□□□ -1.86
Sox1P53783 Gm44052-201ENSMUST00000203382 396 ntBASIC3.43□□□□□ -1.86
Sox1P53783 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.43□□□□□ -1.86
Sox1P53783 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.43□□□□□ -1.86
Sox1P53783 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sox1P53783 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sox1P53783 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sox1P53783 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sox1P53783 Gm25980-201ENSMUST00000157176 218 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Gm23231-201ENSMUST00000157299 104 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Gm22227-201ENSMUST00000157356 259 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Gm22722-201ENSMUST00000157467 132 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Gm22833-201ENSMUST00000158292 132 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Gm25642-201ENSMUST00000175137 66 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Gm25464-201ENSMUST00000175481 107 ntBASIC3.42□□□□□ -1.86
Sox1P53783 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Sox1P53783 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sox1P53783 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Sox1P53783 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sox1P53783 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Sox1P53783 Gm24096-201ENSMUST00000103905 110 ntBASIC3.41□□□□□ -1.86
Sox1P53783 Gm22782-201ENSMUST00000104082 132 ntBASIC3.41□□□□□ -1.86
Sox1P53783 Gm16327-201ENSMUST00000137146 228 ntBASIC3.41□□□□□ -1.86
Sox1P53783 Gm25059-201ENSMUST00000157367 117 ntBASIC3.41□□□□□ -1.86
Sox1P53783 Gm37545-201ENSMUST00000186512 148 ntBASIC3.41□□□□□ -1.86
Sox1P53783 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.41□□□□□ -1.86
Sox1P53783 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Sox1P53783 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.41□□□□□ -1.86
Sox1P53783 Gm11351-202ENSMUST00000225724 478 ntBASIC3.41□□□□□ -1.86
Sox1P53783 Gm24449-201ENSMUST00000083985 106 ntBASIC3.41□□□□□ -1.86
Sox1P53783 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Sox1P53783 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Sox1P53783 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Sox1P53783 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.41□□□□□ -1.86
Sox1P53783 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Sox1P53783 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.4□□□□□ -1.86
Sox1P53783 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Sox1P53783 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.4□□□□□ -1.86
Sox1P53783 Gm23060-201ENSMUST00000102345 109 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Snord90-201ENSMUST00000104568 111 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm23183-201ENSMUST00000122595 323 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.4□□□□□ -1.87
Sox1P53783 Gm26157-201ENSMUST00000158974 126 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm15235-201ENSMUST00000200572 194 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm44703-201ENSMUST00000205724 248 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm45317-201ENSMUST00000210385 223 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.4□□□□□ -1.87
Sox1P53783 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.4□□□□□ -1.87
Sox1P53783 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sox1P53783 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.4□□□□□ -1.87
Sox1P53783 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sox1P53783 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sox1P53783 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Sox1P53783 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sox1P53783 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Sox1P53783 Gm22003-201ENSMUST00000101885 107 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm22382-201ENSMUST00000158185 130 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm25866-201ENSMUST00000158245 112 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Mir3075-201ENSMUST00000175340 85 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm22756-201ENSMUST00000180118 107 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm27893-201ENSMUST00000184408 194 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm9251-201ENSMUST00000197202 628 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Mir378a-201ENSMUST00000198300 66 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm8508-201ENSMUST00000061226 363 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm25589-201ENSMUST00000082502 166 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm22979-201ENSMUST00000082609 159 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm26054-201ENSMUST00000083037 107 ntBASIC3.39□□□□□ -1.87
Sox1P53783 Gm24492-201ENSMUST00000083798 107 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms