Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm27493-201ENSMUST00000184128 78 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm28724-201ENSMUST00000186149 625 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.64□□□□□ -2.15
Col2a1P28481 Gm28169-201ENSMUST00000190342 345 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm29490-201ENSMUST00000190923 342 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm23370-202ENSMUST00000197008 129 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm19202-201ENSMUST00000198096 808 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm43284-201ENSMUST00000200103 253 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm23406-201ENSMUST00000082537 122 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm24460-201ENSMUST00000082731 106 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm25199-201ENSMUST00000083095 104 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm24764-201ENSMUST00000083686 199 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Col2a1P28481 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Gm15029-201ENSMUST00000119742 199 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm14761-201ENSMUST00000121363 262 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm23586-201ENSMUST00000157657 123 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Col2a1P28481 Gm25397-201ENSMUST00000176951 92 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm25284-201ENSMUST00000180345 141 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm28016-201ENSMUST00000184594 196 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm28647-201ENSMUST00000188416 197 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm37923-201ENSMUST00000191624 161 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm42739-201ENSMUST00000200687 226 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm44794-201ENSMUST00000206550 411 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.63□□□□□ -2.15
Col2a1P28481 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
Col2a1P28481 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Col2a1P28481 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Col2a1P28481 Gm13355-201ENSMUST00000117996 317 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm25325-201ENSMUST00000122559 86 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Mir1898-201ENSMUST00000122643 83 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm16358-201ENSMUST00000146046 210 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm26049-201ENSMUST00000157313 108 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm22216-201ENSMUST00000157557 114 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm23122-201ENSMUST00000157645 103 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm23221-201ENSMUST00000158118 93 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm24225-201ENSMUST00000158825 98 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Col2a1P28481 Gm24618-201ENSMUST00000177718 94 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm23953-201ENSMUST00000178214 94 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Col2a1P28481 Gm26332-201ENSMUST00000179813 94 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm22863-201ENSMUST00000180265 94 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.63□□□□□ -2.15
Col2a1P28481 Gm44524-201ENSMUST00000203899 271 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm33654-201ENSMUST00000221704 215 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Gm21937-201ENSMUST00000222825 218 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Col2a1P28481 Gm22620-201ENSMUST00000082700 133 ntBASIC1.63□□□□□ -2.15
Col2a1P28481 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Col2a1P28481 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Col2a1P28481 Gm24582-201ENSMUST00000103967 103 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm24172-201ENSMUST00000104127 117 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm12155-201ENSMUST00000121267 160 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm24908-201ENSMUST00000157294 127 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm23557-201ENSMUST00000157820 138 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm23641-201ENSMUST00000157857 101 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm23779-201ENSMUST00000157938 64 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm22328-201ENSMUST00000158074 112 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm28825-201ENSMUST00000186233 238 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Col2a1P28481 Gm28951-201ENSMUST00000190742 313 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Gm45207-201ENSMUST00000207469 145 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.62□□□□□ -2.15
Col2a1P28481 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Col2a1P28481 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Col2a1P28481 Gm23941-201ENSMUST00000101953 107 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Col2a1P28481 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm12785-201ENSMUST00000122052 172 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm14629-201ENSMUST00000122428 144 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm24630-201ENSMUST00000122768 106 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm23469-201ENSMUST00000157131 104 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm24716-201ENSMUST00000157524 104 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm24487-201ENSMUST00000178017 63 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm37361-201ENSMUST00000194345 132 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.61□□□□□ -2.15
Col2a1P28481 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm26447-201ENSMUST00000082448 129 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Gm24316-201ENSMUST00000083041 107 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.61□□□□□ -2.15
Col2a1P28481 Snord71-201ENSMUST00000104361 85 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm13806-201ENSMUST00000117822 325 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm22389-201ENSMUST00000158193 301 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.6□□□□□ -2.15
Col2a1P28481 Mir6346-201ENSMUST00000183982 81 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm20923-201ENSMUST00000190009 319 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm21088-201ENSMUST00000190875 316 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm43739-201ENSMUST00000198294 307 ntBASIC1.6□□□□□ -2.15
Col2a1P28481 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.6□□□□□ -2.15
Col2a1P28481 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.6□□□□□ -2.15
Col2a1P28481 Gm8940-201ENSMUST00000212585 219 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms