Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28759-201ENSMUST00000187621 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28831-201ENSMUST00000187739 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28200-201ENSMUST00000187778 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29034-201ENSMUST00000188099 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28752-201ENSMUST00000188340 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29378-201ENSMUST00000188723 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28569-201ENSMUST00000188748 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28120-201ENSMUST00000188812 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29308-201ENSMUST00000188863 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28369-201ENSMUST00000188993 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28537-201ENSMUST00000189026 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28909-201ENSMUST00000189406 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28861-201ENSMUST00000189681 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28717-201ENSMUST00000189950 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29180-201ENSMUST00000190003 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29575-201ENSMUST00000190597 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29631-201ENSMUST00000191065 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28160-201ENSMUST00000191229 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29469-201ENSMUST00000191448 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm37693-201ENSMUST00000194562 234 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm37129-201ENSMUST00000195791 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm5010-201ENSMUST00000213131 260 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm46997-201ENSMUST00000222108 217 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm24865-201ENSMUST00000103246 96 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Mir669d-201ENSMUST00000104644 121 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Mir872-201ENSMUST00000104728 81 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm13433-201ENSMUST00000121701 240 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm27926-201ENSMUST00000157180 66 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm26024-201ENSMUST00000158657 322 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Sdc1P18828 Gm27711-201ENSMUST00000183802 118 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.13□□□□□ -2.23
Sdc1P18828 Gm29167-201ENSMUST00000190024 377 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm37128-201ENSMUST00000192599 232 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.13□□□□□ -2.23
Sdc1P18828 Gm44726-201ENSMUST00000203427 217 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Sdc1P18828 Gm25801-201ENSMUST00000082638 106 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm24150-201ENSMUST00000082759 104 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Gm24035-201ENSMUST00000082867 107 ntBASIC1.13□□□□□ -2.23
Sdc1P18828 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Sdc1P18828 Gm15214-201ENSMUST00000122155 470 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm11254-201ENSMUST00000122368 653 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Sdc1P18828 Gm24915-201ENSMUST00000157288 78 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm22227-201ENSMUST00000157356 259 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm23558-201ENSMUST00000157823 80 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm24858-201ENSMUST00000158058 323 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm22537-201ENSMUST00000158172 199 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm22164-201ENSMUST00000158413 106 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm22136-201ENSMUST00000158751 268 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Mir3103-201ENSMUST00000175474 67 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm25314-201ENSMUST00000178810 79 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm28343-201ENSMUST00000185386 112 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm28409-201ENSMUST00000187064 103 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.12□□□□□ -2.23
Sdc1P18828 Gm44754-201ENSMUST00000208155 400 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 Gm45402-201ENSMUST00000211796 223 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Sdc1P18828 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.12□□□□□ -2.23
Sdc1P18828 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Sdc1P18828 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Sdc1P18828 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Mir544-201ENSMUST00000103813 78 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Sdc1P18828 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Gm13729-201ENSMUST00000120328 406 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Gm13992-201ENSMUST00000120558 156 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Sdc1P18828 Gm25707-201ENSMUST00000175120 96 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Mir6997-201ENSMUST00000184313 71 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Gm37054-201ENSMUST00000193481 543 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Sdc1P18828 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.11□□□□□ -2.23
Sdc1P18828 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm26200-201ENSMUST00000180273 79 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm16399-201ENSMUST00000181423 219 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.1□□□□□ -2.23
Sdc1P18828 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Sdc1P18828 Gm24625-201ENSMUST00000082622 130 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm26922-201ENSMUST00000082687 72 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Snord96a-201ENSMUST00000082791 81 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm25038-201ENSMUST00000082928 130 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm26493-201ENSMUST00000083155 136 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm23245-201ENSMUST00000083370 135 ntBASIC1.1□□□□□ -2.23
Sdc1P18828 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.09□□□□□ -2.23
Sdc1P18828 Gm23169-201ENSMUST00000157157 112 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms