Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23203-201ENSMUST00000104374 107 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Gm25543-201ENSMUST00000122678 312 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Gm25981-201ENSMUST00000157921 295 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Gm22802-201ENSMUST00000175621 89 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Gm25156-201ENSMUST00000179809 79 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Gm27428-201ENSMUST00000184289 110 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.32□□□□□ -2.36
Col1a1P11087 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.32□□□□□ -2.36
Col1a1P11087 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
Col1a1P11087 Gm25876-201ENSMUST00000104329 119 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm26150-201ENSMUST00000157426 151 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm24559-201ENSMUST00000157519 121 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm25194-201ENSMUST00000177987 79 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm23648-201ENSMUST00000180301 107 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Mir6355-201ENSMUST00000183687 106 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm28560-201ENSMUST00000186091 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm28334-201ENSMUST00000186653 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm28495-201ENSMUST00000188452 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm28232-201ENSMUST00000188683 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm28481-201ENSMUST00000189231 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm29059-201ENSMUST00000191534 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm37765-201ENSMUST00000192395 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm37237-201ENSMUST00000192893 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm36968-201ENSMUST00000193737 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm38290-201ENSMUST00000195238 315 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.31□□□□□ -2.36
Col1a1P11087 Gm11351-202ENSMUST00000225724 478 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm23506-201ENSMUST00000083077 107 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm26263-201ENSMUST00000083281 164 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Snord33-201ENSMUST00000083694 84 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm23848-201ENSMUST00000083826 106 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.31□□□□□ -2.36
Col1a1P11087 Gm22489-201ENSMUST00000116813 62 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm12806-201ENSMUST00000119384 268 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm14887-201ENSMUST00000119522 663 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm13396-201ENSMUST00000120617 271 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm14551-201ENSMUST00000120802 256 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm22477-201ENSMUST00000122569 316 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm23390-201ENSMUST00000157393 106 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm23538-201ENSMUST00000157535 101 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm23106-201ENSMUST00000157554 101 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm24713-201ENSMUST00000178850 107 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm25448-201ENSMUST00000180065 107 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm28412-201ENSMUST00000187243 177 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm37319-201ENSMUST00000193500 636 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm37089-201ENSMUST00000195616 129 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm18703-201ENSMUST00000215318 333 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 DQ267101-201ENSMUST00000082562 73 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Mir32-201ENSMUST00000083610 70 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.3□□□□□ -2.36
Col1a1P11087 Gm23114-201ENSMUST00000158478 117 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.29□□□□□ -2.36
Col1a1P11087 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.29□□□□□ -2.36
Col1a1P11087 Gm44125-201ENSMUST00000203068 448 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm43914-201ENSMUST00000203592 594 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.29□□□□□ -2.36
Col1a1P11087 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Col1a1P11087 Gm24536-201ENSMUST00000083144 107 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Mir340-201ENSMUST00000083483 98 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm26168-201ENSMUST00000083787 112 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm24047-201ENSMUST00000102405 104 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm22221-201ENSMUST00000157362 103 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm24963-201ENSMUST00000157916 144 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm22522-201ENSMUST00000158271 151 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm24390-201ENSMUST00000179578 62 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm27402-201ENSMUST00000183890 120 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm27545-201ENSMUST00000184755 202 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm38149-201ENSMUST00000191943 339 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm44429-201ENSMUST00000203542 186 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.29□□□□□ -2.36
Col1a1P11087 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Col1a1P11087 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Gm26446-201ENSMUST00000082455 103 ntBASIC0.29□□□□□ -2.36
Col1a1P11087 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col1a1P11087 Gm14362-201ENSMUST00000121679 273 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Gm15254-201ENSMUST00000149567 273 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
Col1a1P11087 Mir3061-201ENSMUST00000175129 91 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Gm25248-201ENSMUST00000175473 98 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Gm20874-201ENSMUST00000178356 663 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Gm29216-201ENSMUST00000187117 492 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.28□□□□□ -2.37
Col1a1P11087 Gm37727-201ENSMUST00000191637 819 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Gm25697-201ENSMUST00000082902 98 ntBASIC0.28□□□□□ -2.37
Col1a1P11087 Mir19a-201ENSMUST00000083482 82 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms