Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm22800-201ENSMUST00000175627 94 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cdh16O88338 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 Gm44666-201ENSMUST00000208544 391 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.47□□□□□ -2.17
Cdh16O88338 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Cdh16O88338 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Cdh16O88338 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 Gm24043-201ENSMUST00000083108 116 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 Gm25651-201ENSMUST00000083782 119 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 Gm22723-201ENSMUST00000083820 129 ntBASIC1.47□□□□□ -2.17
Cdh16O88338 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
Cdh16O88338 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cdh16O88338 Gm42606-201ENSMUST00000114209 239 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm14678-201ENSMUST00000121396 482 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm24262-201ENSMUST00000157431 144 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm24726-201ENSMUST00000158232 121 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm25836-201ENSMUST00000158918 123 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm25035-201ENSMUST00000175414 77 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm26968-201ENSMUST00000182894 481 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm33654-201ENSMUST00000221704 215 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm21937-201ENSMUST00000222825 218 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm25929-201ENSMUST00000082784 107 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Gm22685-201ENSMUST00000082848 106 ntBASIC1.46□□□□□ -2.18
Cdh16O88338 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.46□□□□□ -2.18
Cdh16O88338 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cdh16O88338 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Cdh16O88338 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Cdh16O88338 Gm24275-201ENSMUST00000116780 146 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm11798-201ENSMUST00000119150 421 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm25827-201ENSMUST00000157089 107 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm23983-201ENSMUST00000157142 114 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm22082-201ENSMUST00000157587 161 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm23557-201ENSMUST00000157820 138 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm22099-201ENSMUST00000157925 123 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm25333-201ENSMUST00000158035 246 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm22435-201ENSMUST00000158552 128 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Cdh16O88338 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Mir3569-201ENSMUST00000185080 58 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.45□□□□□ -2.18
Cdh16O88338 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Cdh16O88338 Gm43583-201ENSMUST00000199235 303 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm42960-201ENSMUST00000202160 241 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.45□□□□□ -2.18
Cdh16O88338 Gm45654-201ENSMUST00000210980 123 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm40810-201ENSMUST00000219149 253 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Snord68-201ENSMUST00000082516 86 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm25135-201ENSMUST00000082648 143 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm23242-201ENSMUST00000083055 107 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Gm23100-201ENSMUST00000083455 141 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Mir340-201ENSMUST00000083483 98 ntBASIC1.45□□□□□ -2.18
Cdh16O88338 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.45□□□□□ -2.18
Cdh16O88338 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Cdh16O88338 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Cdh16O88338 Gm23010-201ENSMUST00000104151 126 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm15115-201ENSMUST00000121145 264 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm23048-201ENSMUST00000157237 129 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm23670-201ENSMUST00000157469 119 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm22768-201ENSMUST00000158366 153 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm23024-201ENSMUST00000158770 292 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm24487-201ENSMUST00000178017 63 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm22862-201ENSMUST00000178593 121 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm23793-201ENSMUST00000179396 117 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.44□□□□□ -2.18
Cdh16O88338 Mir7026-201ENSMUST00000184384 67 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm37399-201ENSMUST00000195224 416 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm16976-205ENSMUST00000227324 226 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm22299-201ENSMUST00000082663 136 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Gm26922-201ENSMUST00000082687 72 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.44□□□□□ -2.18
Cdh16O88338 Mir223-201ENSMUST00000102112 110 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm14972-201ENSMUST00000121780 364 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm15365-201ENSMUST00000122392 300 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm25115-201ENSMUST00000157187 140 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm25384-201ENSMUST00000157807 105 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm25982-201ENSMUST00000157920 101 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm22316-201ENSMUST00000158012 216 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm25730-201ENSMUST00000178753 165 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm29005-201ENSMUST00000186773 320 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm28717-201ENSMUST00000189950 315 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm21064-202ENSMUST00000190583 278 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm37579-201ENSMUST00000194291 142 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm43884-201ENSMUST00000204251 559 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm44960-201ENSMUST00000207403 141 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm45119-201ENSMUST00000207612 199 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Gm5023-201ENSMUST00000217442 587 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.43□□□□□ -2.18
Cdh16O88338 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Cdh16O88338 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Cdh16O88338 Gm22761-201ENSMUST00000102278 96 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms