Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm6956-201ENSMUST00000134724 546 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Col5a1O88207 Gm27926-201ENSMUST00000157180 66 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24997-201ENSMUST00000157910 105 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24499-201ENSMUST00000158446 104 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Mir5624-201ENSMUST00000176635 61 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24799-201ENSMUST00000178431 79 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.26□□□□□ -2.21
Col5a1O88207 Gm44794-201ENSMUST00000206550 411 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm7065-201ENSMUST00000222150 474 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24623-201ENSMUST00000082616 194 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24165-201ENSMUST00000082718 128 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Mir10a-201ENSMUST00000083585 110 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Col5a1O88207 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col5a1O88207 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
Col5a1O88207 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col5a1O88207 Gm14551-201ENSMUST00000120802 256 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm22560-201ENSMUST00000157332 120 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm9830-201ENSMUST00000178509 357 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm24264-201ENSMUST00000179835 94 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm27520-201ENSMUST00000184872 81 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm27332-201ENSMUST00000184893 112 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm18551-201ENSMUST00000195594 642 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm44063-201ENSMUST00000203307 376 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm45315-201ENSMUST00000209283 333 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Mir211-201ENSMUST00000083651 106 ntBASIC1.25□□□□□ -2.21
Col5a1O88207 Gm24172-201ENSMUST00000104127 117 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm13876-201ENSMUST00000118451 261 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm12235-201ENSMUST00000118596 170 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm14972-201ENSMUST00000121780 364 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm14770-201ENSMUST00000122197 312 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm23713-201ENSMUST00000157353 70 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm25384-201ENSMUST00000157807 105 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm22615-201ENSMUST00000158102 70 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm16289-201ENSMUST00000162079 183 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm22263-201ENSMUST00000180060 104 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm28016-201ENSMUST00000184594 196 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Mir195b-201ENSMUST00000184814 97 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm27624-201ENSMUST00000185047 177 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col5a1O88207 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col5a1O88207 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm37557-201ENSMUST00000191640 139 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm7871-201ENSMUST00000195346 618 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Mir3970-201ENSMUST00000199287 90 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm42594-201ENSMUST00000199511 246 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm44462-201ENSMUST00000199696 129 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm44446-201ENSMUST00000204864 255 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.24□□□□□ -2.21
Col5a1O88207 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm23517-201ENSMUST00000082830 192 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm25793-201ENSMUST00000083287 107 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm26066-201ENSMUST00000083385 109 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm15029-201ENSMUST00000119742 199 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm23214-201ENSMUST00000122716 157 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm23331-201ENSMUST00000157423 108 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm23779-201ENSMUST00000157938 64 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm22389-201ENSMUST00000158193 301 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm22435-201ENSMUST00000158552 128 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm24225-201ENSMUST00000158825 98 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.24□□□□□ -2.21
Col5a1O88207 Gm28717-201ENSMUST00000189950 315 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Snord68-201ENSMUST00000082516 86 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm22507-201ENSMUST00000082773 160 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm23723-201ENSMUST00000082996 132 ntBASIC1.24□□□□□ -2.21
Col5a1O88207 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Col5a1O88207 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col5a1O88207 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm26504-201ENSMUST00000102033 94 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25315-201ENSMUST00000116823 121 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm14837-201ENSMUST00000119688 206 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm14269-201ENSMUST00000120455 306 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm12155-201ENSMUST00000121267 160 ntBASIC1.23□□□□□ -2.21
Col5a1O88207 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.23□□□□□ -2.21
Col5a1O88207 Gm25768-201ENSMUST00000158570 98 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms