Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.82□□□□□ -2.12
Cldn5O54942 Gm24151-201ENSMUST00000082758 141 ntBASIC1.82□□□□□ -2.12
Cldn5O54942 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Cldn5O54942 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm22217-201ENSMUST00000157556 313 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm24499-201ENSMUST00000158446 104 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm20477-201ENSMUST00000174028 280 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm22510-201ENSMUST00000179304 79 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm26336-201ENSMUST00000179449 79 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm26390-201ENSMUST00000179628 79 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm28257-201ENSMUST00000185244 463 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm28925-201ENSMUST00000188586 168 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm29167-201ENSMUST00000190024 377 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm36891-201ENSMUST00000191995 655 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.81□□□□□ -2.12
Cldn5O54942 Gm43238-201ENSMUST00000196463 359 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Mir340-201ENSMUST00000083483 98 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 Gm22365-201ENSMUST00000093750 117 ntBASIC1.81□□□□□ -2.12
Cldn5O54942 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm22761-201ENSMUST00000102278 96 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm23015-201ENSMUST00000104145 128 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm11798-201ENSMUST00000119150 421 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm14678-201ENSMUST00000121396 482 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm25827-201ENSMUST00000157089 107 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm24572-201ENSMUST00000175505 88 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm24487-201ENSMUST00000178017 63 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm26265-202ENSMUST00000196326 133 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Cldn5O54942 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.8□□□□□ -2.12
Cldn5O54942 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.8□□□□□ -2.12
Cldn5O54942 U6.1-201ENSMUST00000157443 101 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 Gm26200-201ENSMUST00000180273 79 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 Gm27511-201ENSMUST00000183502 127 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 Gm27410-201ENSMUST00000183851 115 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Cldn5O54942 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.79□□□□□ -2.12
Cldn5O54942 Gm10360-201ENSMUST00000097219 272 ntBASIC1.79□□□□□ -2.12
Cldn5O54942 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Cldn5O54942 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
Cldn5O54942 Gm15162-201ENSMUST00000119325 283 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm11862-201ENSMUST00000119678 659 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm14972-201ENSMUST00000121780 364 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm23535-201ENSMUST00000157542 106 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm25434-201ENSMUST00000158278 167 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm23181-201ENSMUST00000158685 110 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm24618-201ENSMUST00000177718 94 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm23953-201ENSMUST00000178214 94 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm26332-201ENSMUST00000179813 94 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm22863-201ENSMUST00000180265 94 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm44320-201ENSMUST00000199276 86 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm43993-201ENSMUST00000203972 247 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm44811-201ENSMUST00000209120 228 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm24152-201ENSMUST00000082764 163 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm24805-201ENSMUST00000082931 104 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.78□□□□□ -2.12
Cldn5O54942 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Cldn5O54942 Gm24770-201ENSMUST00000158505 92 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Gm22075-201ENSMUST00000158599 192 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Gm24390-201ENSMUST00000179578 62 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Gm43431-201ENSMUST00000198577 340 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Gm44960-201ENSMUST00000207403 141 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Gm34783-201ENSMUST00000209159 303 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.77□□□□□ -2.13
Cldn5O54942 Gm24615-201ENSMUST00000083268 113 ntBASIC1.77□□□□□ -2.13
Cldn5O54942 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Cldn5O54942 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Cldn5O54942 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Cldn5O54942 Gm25982-201ENSMUST00000157920 101 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm24851-201ENSMUST00000158028 103 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm22447-201ENSMUST00000158155 92 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm25371-201ENSMUST00000158162 101 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm16162-201ENSMUST00000162296 297 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Mir6388-201ENSMUST00000184417 75 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.76□□□□□ -2.13
Cldn5O54942 Gm9156-201ENSMUST00000189660 463 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm37399-201ENSMUST00000195224 416 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm5899-201ENSMUST00000071770 270 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm23242-201ENSMUST00000083055 107 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
Cldn5O54942 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.76□□□□□ -2.13
Cldn5O54942 Gm23142-201ENSMUST00000101848 105 ntBASIC1.75□□□□□ -2.13
Cldn5O54942 Gm26240-201ENSMUST00000101893 105 ntBASIC1.75□□□□□ -2.13
Cldn5O54942 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms