Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm23932-201ENSMUST00000082914 107 ntBASIC-0.16□□□□□ -2.44
Col6a3E9PWQ3 Gm24997-201ENSMUST00000157910 105 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm15508-201ENSMUST00000160330 325 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm28560-201ENSMUST00000186091 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm28666-201ENSMUST00000186649 274 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm28334-201ENSMUST00000186653 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm28495-201ENSMUST00000188452 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm28232-201ENSMUST00000188683 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm28481-201ENSMUST00000189231 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm29059-201ENSMUST00000191534 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm37765-201ENSMUST00000192395 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm37237-201ENSMUST00000192893 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm36968-201ENSMUST00000193737 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm38290-201ENSMUST00000195238 315 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm44524-201ENSMUST00000203899 271 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm15807-201ENSMUST00000119880 1128 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm14129-201ENSMUST00000122436 291 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Mir703-201ENSMUST00000197105 109 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm18213-201ENSMUST00000207850 178 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 AC124772.1-201ENSMUST00000221325 151 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm20102-201ENSMUST00000222445 220 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm22997-201ENSMUST00000082845 107 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm37642-201ENSMUST00000193166 1735 ntBASIC-0.17□□□□□ -2.44
Col6a3E9PWQ3 Gm7429-201ENSMUST00000118664 348 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm14530-201ENSMUST00000122391 333 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm14903-201ENSMUST00000122435 537 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 n-R5s63-201ENSMUST00000122756 103 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm25243-201ENSMUST00000174912 207 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm27599-201ENSMUST00000183758 174 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 AC123062.1-201ENSMUST00000221287 481 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 CT030662.3-201ENSMUST00000228751 476 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm23407-201ENSMUST00000082538 91 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm19428-201ENSMUST00000220512 1995 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm12370-201ENSMUST00000117809 604 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm25371-201ENSMUST00000158162 101 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm12105-201ENSMUST00000120846 779 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm19891-201ENSMUST00000189771 303 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.18□□□□□ -2.44
Col6a3E9PWQ3 Gm23586-201ENSMUST00000157657 123 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm28409-201ENSMUST00000187064 103 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm37102-201ENSMUST00000195740 1105 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm43529-201ENSMUST00000199178 412 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm25792-201ENSMUST00000083289 100 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm22779-201ENSMUST00000104085 107 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm13396-201ENSMUST00000120617 271 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm11849-201ENSMUST00000121293 261 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm11384-201ENSMUST00000121376 303 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm24851-201ENSMUST00000158028 103 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm23617-201ENSMUST00000175410 95 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm22510-201ENSMUST00000179304 79 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm26336-201ENSMUST00000179449 79 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm26390-201ENSMUST00000179628 79 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Mir6419-201ENSMUST00000184784 113 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Mir6372-201ENSMUST00000185114 109 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm37089-201ENSMUST00000195616 129 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm44921-201ENSMUST00000205290 301 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Mir599-201ENSMUST00000102378 88 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm11512-201ENSMUST00000119669 663 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm22731-201ENSMUST00000158086 94 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.19□□□□□ -2.44
Col6a3E9PWQ3 Gm29661-201ENSMUST00000186781 315 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms