Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm24984-201ENSMUST00000104454 133 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm14782-201ENSMUST00000120151 195 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Mir7683-201ENSMUST00000183842 61 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm27399-201ENSMUST00000184250 78 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm44256-201ENSMUST00000203304 335 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm35736-201ENSMUST00000203681 313 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Gm44654-201ENSMUST00000208052 329 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Trav5-4A0A075B652 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
Trav5-4A0A075B652 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm13518-201ENSMUST00000120018 233 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm15861-201ENSMUST00000120979 339 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm8121-201ENSMUST00000153583 499 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm24010-201ENSMUST00000157731 282 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm24237-201ENSMUST00000157790 132 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm25333-201ENSMUST00000158035 246 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm16162-201ENSMUST00000162296 297 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm28717-201ENSMUST00000189950 315 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm32175-201ENSMUST00000193641 346 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm43587-201ENSMUST00000199590 204 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm45013-201ENSMUST00000206883 178 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm45907-201ENSMUST00000213023 193 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm46997-201ENSMUST00000222108 217 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm24625-201ENSMUST00000082622 130 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm24536-201ENSMUST00000083144 107 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Mir32-201ENSMUST00000083610 70 ntBASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trav5-4A0A075B652 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Mir3096-201ENSMUST00000116685 71 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm13992-201ENSMUST00000120558 156 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm12956-201ENSMUST00000122184 414 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm24632-201ENSMUST00000122770 323 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm25491-201ENSMUST00000158733 308 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm17052-201ENSMUST00000165496 289 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm27793-201ENSMUST00000183405 76 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm27845-201ENSMUST00000184479 114 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm38041-201ENSMUST00000194445 661 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm44491-201ENSMUST00000196794 96 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm20144-201ENSMUST00000203031 165 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Gm10264-201ENSMUST00000220589 429 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Mir222-201ENSMUST00000083537 79 ntBASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav5-4A0A075B652 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm25529-201ENSMUST00000104850 92 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm14709-201ENSMUST00000121225 304 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm22281-201ENSMUST00000157198 103 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm25460-201ENSMUST00000157954 127 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm22085-201ENSMUST00000158344 110 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Mir7016-201ENSMUST00000184308 72 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm28288-201ENSMUST00000191019 214 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Snord42a-201ENSMUST00000082606 65 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm26329-201ENSMUST00000093723 110 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Trav5-4A0A075B652 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm12785-201ENSMUST00000122052 172 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm22843-201ENSMUST00000157710 134 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm22945-201ENSMUST00000158557 157 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm23342-201ENSMUST00000158958 115 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm23921-201ENSMUST00000175258 107 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm25730-201ENSMUST00000178753 165 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm37918-201ENSMUST00000192071 120 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Gm44477-201ENSMUST00000199661 110 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.68□□□□□ -2.14
Trav5-4A0A075B652 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Gm24098-201ENSMUST00000102075 109 ntBASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Gm25381-201ENSMUST00000102078 109 ntBASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Gm25094-201ENSMUST00000103992 131 ntBASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Gm24068-201ENSMUST00000104513 132 ntBASIC1.67□□□□□ -2.14
Trav5-4A0A075B652 Gm11471-201ENSMUST00000121824 198 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms