Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm26435-201ENSMUST00000179026 107 ntBASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 Gm28408-201ENSMUST00000191557 463 ntBASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 Gm44211-201ENSMUST00000204867 145 ntBASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 Gm5899-201ENSMUST00000071770 270 ntBASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Trav8-1A0A075B641 Gm12837-201ENSMUST00000120131 373 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm14269-201ENSMUST00000120455 306 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm14599-201ENSMUST00000120469 474 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm11334-201ENSMUST00000121969 156 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm13368-201ENSMUST00000122443 430 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm24963-201ENSMUST00000157916 144 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm24960-201ENSMUST00000157923 90 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm25413-201ENSMUST00000158544 312 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm24510-201ENSMUST00000174965 94 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm27475-201ENSMUST00000183420 61 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Mir6389-201ENSMUST00000183661 102 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Mir7065-201ENSMUST00000185110 61 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm19901-201ENSMUST00000192191 495 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm22577-201ENSMUST00000083731 109 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.08□□□□□ -2.4
Trav8-1A0A075B641 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Gm28921-201ENSMUST00000190219 378 ntBASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Gm43406-201ENSMUST00000200356 334 ntBASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.07□□□□□ -2.4
Trav8-1A0A075B641 Gm9059-201ENSMUST00000118319 183 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm6272-201ENSMUST00000121256 171 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm13577-201ENSMUST00000121365 205 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm14846-201ENSMUST00000121868 216 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm23435-201ENSMUST00000157183 156 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm23387-201ENSMUST00000158586 107 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Mir3079-201ENSMUST00000175428 90 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm25799-201ENSMUST00000082643 107 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm24261-201ENSMUST00000083744 104 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Gm10780-201ENSMUST00000099459 285 ntBASIC0.06□□□□□ -2.4
Trav8-1A0A075B641 Mir710-201ENSMUST00000102088 110 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm24833-201ENSMUST00000116775 120 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm23118-201ENSMUST00000122657 187 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm23535-201ENSMUST00000157542 106 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm22339-201ENSMUST00000157718 62 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm24439-201ENSMUST00000157894 117 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm22633-201ENSMUST00000179834 107 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm37709-201ENSMUST00000195074 600 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.05□□□□□ -2.4
Trav8-1A0A075B641 Gm24430-201ENSMUST00000104077 104 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm22545-201ENSMUST00000104350 132 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm25563-201ENSMUST00000104603 74 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm14765-201ENSMUST00000121954 326 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm25557-201ENSMUST00000158084 315 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm22565-201ENSMUST00000175540 69 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm23862-201ENSMUST00000180342 94 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Mir8090-201ENSMUST00000185078 136 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm37757-201ENSMUST00000193072 210 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm24045-201ENSMUST00000083113 98 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Trav8-1A0A075B641 Gm23958-201ENSMUST00000157207 105 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Gm44921-201ENSMUST00000205290 301 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Gm44870-201ENSMUST00000207291 357 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Gm45541-201ENSMUST00000210443 54 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Gm30155-201ENSMUST00000223458 339 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Gm24038-201ENSMUST00000082872 159 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Mir101a-201ENSMUST00000083517 83 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Mir452-201ENSMUST00000093629 85 ntBASIC0.03□□□□□ -2.4
Trav8-1A0A075B641 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trav8-1A0A075B641 Gm23991-201ENSMUST00000117033 93 ntBASIC0.02□□□□□ -2.41
Trav8-1A0A075B641 Gm11248-201ENSMUST00000119568 201 ntBASIC0.02□□□□□ -2.41
Trav8-1A0A075B641 Gm12433-201ENSMUST00000119659 255 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms