Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm25113-201ENSMUST00000157185 143 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm22803-201ENSMUST00000158049 283 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm16038-201ENSMUST00000159317 193 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm20257-202ENSMUST00000188643 130 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm43583-201ENSMUST00000199235 303 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm10264-201ENSMUST00000220589 429 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Snord68-201ENSMUST00000082516 86 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Gm23404-201ENSMUST00000082543 97 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Mir29c-201ENSMUST00000083614 88 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Mir107-201ENSMUST00000083660 87 ntBASIC1.78□□□□□ -2.12
Cldn3Q9Z0G9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm24192-201ENSMUST00000157978 145 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Mir669n-201ENSMUST00000158636 54 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm26159-201ENSMUST00000158968 104 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm21827-201ENSMUST00000178247 423 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm37162-201ENSMUST00000191708 551 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm26175-201ENSMUST00000083794 131 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Snora33-201ENSMUST00000093556 129 ntBASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
Cldn3Q9Z0G9 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Mir758-201ENSMUST00000103260 81 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm23950-201ENSMUST00000104026 129 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm14906-201ENSMUST00000119265 390 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm22080-201ENSMUST00000157591 106 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm22843-201ENSMUST00000157710 134 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm22664-201ENSMUST00000158719 105 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm25994-201ENSMUST00000175392 101 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Mir28b-201ENSMUST00000175399 80 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm24487-201ENSMUST00000178017 63 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm23793-201ENSMUST00000179396 117 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Mir6406-201ENSMUST00000183592 120 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm29229-201ENSMUST00000188874 323 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Gm43512-201ENSMUST00000198495 176 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Mir151-201ENSMUST00000083678 68 ntBASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Cldn3Q9Z0G9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm11786-201ENSMUST00000120799 155 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm25392-201ENSMUST00000157335 297 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm23043-201ENSMUST00000157890 109 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm25982-201ENSMUST00000157920 101 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm22113-201ENSMUST00000158343 104 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm20613-201ENSMUST00000175828 345 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm25820-202ENSMUST00000197479 128 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm45150-201ENSMUST00000206051 467 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm44960-201ENSMUST00000207403 141 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Gm25929-201ENSMUST00000082784 107 ntBASIC1.75□□□□□ -2.13
Cldn3Q9Z0G9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm23120-201ENSMUST00000157654 287 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm26024-201ENSMUST00000158657 322 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm24308-201ENSMUST00000177773 114 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Mir7679-201ENSMUST00000183379 63 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Gm22685-201ENSMUST00000082848 106 ntBASIC1.74□□□□□ -2.13
Cldn3Q9Z0G9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Mir872-201ENSMUST00000104728 81 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm14803-201ENSMUST00000117163 361 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm11859-201ENSMUST00000118099 455 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm3788-201ENSMUST00000119949 136 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm13518-201ENSMUST00000120018 233 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm13729-201ENSMUST00000120328 406 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Mir1949-201ENSMUST00000157434 141 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm26864-201ENSMUST00000181346 156 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm28257-201ENSMUST00000185244 463 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm44010-201ENSMUST00000204432 331 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Gm26922-201ENSMUST00000082687 72 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Mir340-201ENSMUST00000083483 98 ntBASIC1.73□□□□□ -2.13
Cldn3Q9Z0G9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Cldn3Q9Z0G9 Gm11254-201ENSMUST00000122368 653 ntBASIC1.72□□□□□ -2.13
Cldn3Q9Z0G9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.72□□□□□ -2.13
Cldn3Q9Z0G9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms