Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm22731-201ENSMUST00000158086 94 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm24726-201ENSMUST00000158232 121 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm24085-201ENSMUST00000175172 116 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm25730-201ENSMUST00000178753 165 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm23191-201ENSMUST00000179147 107 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm44429-201ENSMUST00000203542 186 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm23100-201ENSMUST00000083455 141 ntBASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
Upk3aQ9JKX8 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm14678-201ENSMUST00000121396 482 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm24638-201ENSMUST00000179807 132 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm25121-201ENSMUST00000179846 79 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Mir7683-201ENSMUST00000183842 61 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Mir8090-201ENSMUST00000185078 136 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Mir1291-201ENSMUST00000199842 117 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm23627-201ENSMUST00000082459 107 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm22502-201ENSMUST00000082488 107 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm22977-201ENSMUST00000082615 107 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm24149-201ENSMUST00000082757 107 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Snora34-201ENSMUST00000083402 138 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm26314-201ENSMUST00000083891 107 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm3867-201ENSMUST00000086108 279 ntBASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Upk3aQ9JKX8 Gm25421-201ENSMUST00000104218 164 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm14296-202ENSMUST00000108931 750 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm24262-201ENSMUST00000157431 144 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm23120-201ENSMUST00000157654 287 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm25333-201ENSMUST00000158035 246 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm23858-201ENSMUST00000158384 106 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm37337-201ENSMUST00000192601 993 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm26164-201ENSMUST00000083793 104 ntBASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Upk3aQ9JKX8 Gm25543-201ENSMUST00000122678 312 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Gm22556-201ENSMUST00000157803 100 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Gm16038-201ENSMUST00000159317 193 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Gm23289-201ENSMUST00000175615 108 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Gm26180-201ENSMUST00000179942 107 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.45□□□□□ -2.18
Upk3aQ9JKX8 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm25832-201ENSMUST00000104140 130 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm11512-201ENSMUST00000119669 663 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm6829-201ENSMUST00000119858 360 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm22603-201ENSMUST00000157603 96 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm24005-201ENSMUST00000158459 296 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm22435-201ENSMUST00000158552 128 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm20477-201ENSMUST00000174028 280 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm21754-201ENSMUST00000177550 479 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm28848-201ENSMUST00000189984 168 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm43723-201ENSMUST00000196886 189 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Gm43367-201ENSMUST00000199986 625 ntBASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Upk3aQ9JKX8 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm11854-201ENSMUST00000117839 446 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm12351-201ENSMUST00000118727 292 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm23558-201ENSMUST00000157823 80 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm20438-201ENSMUST00000174441 329 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm44408-201ENSMUST00000200205 66 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm45119-201ENSMUST00000207612 199 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Snord68-201ENSMUST00000082516 86 ntBASIC1.43□□□□□ -2.18
Upk3aQ9JKX8 Gm23731-201ENSMUST00000083749 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms