Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm44010-201ENSMUST00000204432 331 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm23345-201ENSMUST00000083817 150 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm27926-201ENSMUST00000157180 66 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm22037-201ENSMUST00000157280 296 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm25335-201ENSMUST00000158043 103 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm25956-201ENSMUST00000175115 217 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm27624-201ENSMUST00000185047 177 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm28848-201ENSMUST00000189984 168 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm44446-201ENSMUST00000204864 255 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm25788-201ENSMUST00000082721 131 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 Gm25937-201ENSMUST00000083912 107 ntBASIC1.73□□□□□ -2.13
Scn5aQ9JJV9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm23169-201ENSMUST00000157157 112 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm23324-201ENSMUST00000157421 131 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm22085-201ENSMUST00000158344 110 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm29397-201ENSMUST00000185205 333 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm38050-201ENSMUST00000191904 238 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm44909-201ENSMUST00000208756 165 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Mir423-201ENSMUST00000083584 109 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.72□□□□□ -2.13
Scn5aQ9JJV9 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.71□□□□□ -2.13
Scn5aQ9JJV9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
Scn5aQ9JJV9 Gm15010-201ENSMUST00000117153 407 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm17100-201ENSMUST00000168963 272 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm23793-201ENSMUST00000179396 117 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm43739-201ENSMUST00000198294 307 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm15896-201ENSMUST00000118045 440 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm23184-201ENSMUST00000122594 131 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm28008-201ENSMUST00000184021 186 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm43510-201ENSMUST00000197922 353 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm24623-201ENSMUST00000082616 194 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm24412-201ENSMUST00000083426 109 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm25512-201ENSMUST00000083863 107 ntBASIC1.71□□□□□ -2.14
Scn5aQ9JJV9 Gm26500-201ENSMUST00000101867 106 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm9059-201ENSMUST00000118319 183 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm11572-201ENSMUST00000119164 120 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm23589-201ENSMUST00000157660 105 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm24005-201ENSMUST00000158459 296 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm16038-201ENSMUST00000159317 193 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm42807-201ENSMUST00000200141 329 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Gm44419-201ENSMUST00000203338 229 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Scn5aQ9JJV9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm14774-201ENSMUST00000117857 536 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm24504-201ENSMUST00000157679 100 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm23921-201ENSMUST00000175258 107 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm23721-201ENSMUST00000083005 107 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm26111-201ENSMUST00000083969 106 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm26329-201ENSMUST00000093723 110 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm25827-201ENSMUST00000157089 107 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm26157-201ENSMUST00000158974 126 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Snord68-201ENSMUST00000082516 86 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn5aQ9JJV9 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm25958-201ENSMUST00000175114 71 ntBASIC1.68□□□□□ -2.14
Scn5aQ9JJV9 Gm22263-201ENSMUST00000180060 104 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms