Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm22758-201ENSMUST00000102275 96 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm13756-201ENSMUST00000117618 222 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm25889-201ENSMUST00000157775 107 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm23365-201ENSMUST00000175019 125 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm25960-201ENSMUST00000175110 125 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm44453-201ENSMUST00000175161 126 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mir3106-201ENSMUST00000175401 82 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm22120-201ENSMUST00000175590 70 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm25195-201ENSMUST00000177656 126 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mir713-201ENSMUST00000178651 108 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mir129b-201ENSMUST00000197461 65 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
Trim39Q9ESN2 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Mir291a-201ENSMUST00000104815 82 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Gm11285-201ENSMUST00000118443 322 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Gm12954-201ENSMUST00000118610 611 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Gm21064-202ENSMUST00000190583 278 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Gm44459-201ENSMUST00000203926 160 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Gm23247-201ENSMUST00000083373 107 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim39Q9ESN2 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm26418-201ENSMUST00000104275 137 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm24747-201ENSMUST00000157835 87 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm22946-201ENSMUST00000158558 82 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm22501-201ENSMUST00000158981 127 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm10357-201ENSMUST00000159886 264 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Mir3104-201ENSMUST00000174911 63 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm20613-201ENSMUST00000175828 345 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm29452-201ENSMUST00000187996 313 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm18665-201ENSMUST00000189783 270 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm38364-201ENSMUST00000191814 179 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm37281-201ENSMUST00000192412 439 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm37575-201ENSMUST00000195467 309 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm44256-201ENSMUST00000203304 335 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm44294-201ENSMUST00000205090 728 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm25797-201ENSMUST00000082640 107 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Gm26265-201ENSMUST00000083277 135 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim39Q9ESN2 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm6071-201ENSMUST00000119561 440 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm11644-201ENSMUST00000119735 150 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm11471-201ENSMUST00000121824 198 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm25060-201ENSMUST00000157374 130 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm26084-201ENSMUST00000157903 104 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm22070-201ENSMUST00000178475 107 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm26435-201ENSMUST00000179026 107 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gm37001-201ENSMUST00000193377 190 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Mir346-201ENSMUST00000083547 98 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Mir466-201ENSMUST00000093591 73 ntBASIC3.34□□□□□ -1.87
Trim39Q9ESN2 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Trim39Q9ESN2 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm24634-201ENSMUST00000158672 107 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm27934-201ENSMUST00000158795 63 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Mir6402-201ENSMUST00000183406 80 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm29408-201ENSMUST00000187536 216 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm28912-201ENSMUST00000189001 234 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm44326-201ENSMUST00000198226 101 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim39Q9ESN2 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.33□□□□□ -1.88
Trim39Q9ESN2 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.33□□□□□ -1.88
Trim39Q9ESN2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 184.5 ms