Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm24966-201ENSMUST00000082443 79 ntBASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Snord47-201ENSMUST00000083034 77 ntBASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Gm26495-201ENSMUST00000083152 137 ntBASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Gm24698-201ENSMUST00000083883 130 ntBASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.91□□□□□ -1.94
Cldnd1Q9CQX5 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Cldnd1Q9CQX5 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Mir682-201ENSMUST00000102281 96 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm22270-201ENSMUST00000104034 132 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm15282-201ENSMUST00000117707 300 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm24388-201ENSMUST00000177872 107 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Mir7242-201ENSMUST00000183710 79 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm22622-201ENSMUST00000082870 129 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm22973-201ENSMUST00000083298 191 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.9□□□□□ -1.95
Cldnd1Q9CQX5 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm26249-201ENSMUST00000116708 118 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm25783-201ENSMUST00000122525 190 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm26279-201ENSMUST00000157095 102 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm22883-201ENSMUST00000157376 106 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm22842-201ENSMUST00000157709 118 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm7592-201ENSMUST00000160674 627 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm7582-201ENSMUST00000160831 603 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm22853-201ENSMUST00000174974 131 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm44322-201ENSMUST00000196830 115 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm23039-201ENSMUST00000083870 161 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm24164-201ENSMUST00000093663 104 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cldnd1Q9CQX5 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm12155-201ENSMUST00000121267 160 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm22482-201ENSMUST00000122563 359 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm16533-201ENSMUST00000140035 228 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm24291-201ENSMUST00000157633 162 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm24750-201ENSMUST00000157843 104 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm22651-201ENSMUST00000157872 94 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Mir3075-201ENSMUST00000175340 85 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm27476-201ENSMUST00000183366 104 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm27761-201ENSMUST00000184091 131 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm38311-201ENSMUST00000192945 165 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm25820-202ENSMUST00000197479 128 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm43220-201ENSMUST00000199299 282 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm6796-201ENSMUST00000211919 243 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Gm24163-201ENSMUST00000093660 132 ntBASIC2.88□□□□□ -1.95
Cldnd1Q9CQX5 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Mir499-201ENSMUST00000102357 79 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm25625-201ENSMUST00000157221 96 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm25866-201ENSMUST00000158245 112 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm25834-201ENSMUST00000158916 101 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm25457-201ENSMUST00000179509 107 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm44459-201ENSMUST00000203926 160 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm45002-201ENSMUST00000208045 120 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm45543-201ENSMUST00000209327 88 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm45288-201ENSMUST00000210236 151 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Cldnd1Q9CQX5 Gm26026-201ENSMUST00000122726 123 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm24443-201ENSMUST00000157242 132 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm23588-201ENSMUST00000157659 99 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm22336-201ENSMUST00000157719 107 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm27700-201ENSMUST00000185003 81 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm42774-201ENSMUST00000198854 283 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Gm20144-201ENSMUST00000203031 165 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Mir127-201ENSMUST00000093568 70 ntBASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Cldnd1Q9CQX5 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms