Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm6003-201ENSMUST00000187903 463 ntBASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Gm29553-201ENSMUST00000189692 279 ntBASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Gm44182-201ENSMUST00000204052 115 ntBASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Gm10242-201ENSMUST00000090064 330 ntBASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx6-1Q99MA9 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm24276-201ENSMUST00000102181 110 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm17522-201ENSMUST00000178144 498 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.17□□□□□ -1.9
Nkx6-1Q99MA9 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm24263-201ENSMUST00000104059 107 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm11356-201ENSMUST00000118974 192 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm25321-201ENSMUST00000122558 102 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm26215-201ENSMUST00000158584 139 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Mir3103-201ENSMUST00000175474 67 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm43239-201ENSMUST00000200131 201 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm26265-201ENSMUST00000083277 135 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm23040-201ENSMUST00000083869 163 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx6-1Q99MA9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.15□□□□□ -1.9
Nkx6-1Q99MA9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Gm15861-201ENSMUST00000120979 339 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Gm22476-201ENSMUST00000158902 100 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Gm17161-201ENSMUST00000169187 524 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Gm37693-201ENSMUST00000194562 234 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx6-1Q99MA9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm22193-201ENSMUST00000116868 76 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm12449-201ENSMUST00000117572 234 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm13801-201ENSMUST00000120750 160 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm24480-201ENSMUST00000157442 103 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm23101-201ENSMUST00000157550 137 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm22553-201ENSMUST00000157797 295 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm22483-201ENSMUST00000157986 274 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm25142-201ENSMUST00000082698 107 ntBASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Nkx6-1Q99MA9 Gm23277-201ENSMUST00000157914 136 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm22384-201ENSMUST00000158187 104 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm26405-201ENSMUST00000158495 100 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm22699-201ENSMUST00000175376 105 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm20672-201ENSMUST00000176605 261 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm27582-201ENSMUST00000184084 126 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm44476-201ENSMUST00000196225 91 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Mir1291-201ENSMUST00000199842 117 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm44399-201ENSMUST00000205043 226 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm44964-201ENSMUST00000207011 273 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Snora34-201ENSMUST00000083402 138 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Nkx6-1Q99MA9 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nkx6-1Q99MA9 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.12□□□□□ -1.91
Nkx6-1Q99MA9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.12□□□□□ -1.91
Nkx6-1Q99MA9 Snord89-201ENSMUST00000104516 110 ntBASIC3.12□□□□□ -1.91
Nkx6-1Q99MA9 Mir1198-201ENSMUST00000116995 121 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms