Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm12513-201ENSMUST00000118617 352 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm25888-201ENSMUST00000157778 302 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Mir1951-201ENSMUST00000157981 89 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm26482-201ENSMUST00000158015 62 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm26405-201ENSMUST00000158495 100 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm20672-201ENSMUST00000176605 261 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.61□□□□□ -1.83
Clp1Q99LI9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm11351-202ENSMUST00000225724 478 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm23615-201ENSMUST00000082602 65 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm25142-201ENSMUST00000082698 107 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm26493-201ENSMUST00000083155 136 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.61□□□□□ -1.83
Clp1Q99LI9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Clp1Q99LI9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clp1Q99LI9 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clp1Q99LI9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clp1Q99LI9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm14491-201ENSMUST00000121919 199 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm23592-201ENSMUST00000157859 117 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm25267-201ENSMUST00000158522 63 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clp1Q99LI9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm44256-201ENSMUST00000203304 335 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clp1Q99LI9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Clp1Q99LI9 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.6□□□□□ -1.83
Clp1Q99LI9 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clp1Q99LI9 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Clp1Q99LI9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm24598-201ENSMUST00000122510 74 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm23381-201ENSMUST00000157676 94 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm25716-201ENSMUST00000158628 104 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm26022-201ENSMUST00000158663 108 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm26435-201ENSMUST00000179026 107 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm44182-201ENSMUST00000204052 115 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Gm44887-201ENSMUST00000208980 178 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.59□□□□□ -1.83
Clp1Q99LI9 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Clp1Q99LI9 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Clp1Q99LI9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Clp1Q99LI9 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Clp1Q99LI9 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm12449-201ENSMUST00000117572 234 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm23668-201ENSMUST00000157465 111 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Mir6916-201ENSMUST00000184514 63 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm37037-201ENSMUST00000194475 424 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm24977-201ENSMUST00000083106 163 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.58□□□□□ -1.84
Clp1Q99LI9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.58□□□□□ -1.84
Clp1Q99LI9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm22476-201ENSMUST00000158902 100 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm26097-201ENSMUST00000179642 93 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm27851-201ENSMUST00000183529 63 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm27783-201ENSMUST00000183534 105 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm43676-201ENSMUST00000197532 540 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm44666-201ENSMUST00000208544 391 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm26126-201ENSMUST00000083188 164 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm23246-201ENSMUST00000083371 67 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Gm22154-201ENSMUST00000083844 131 ntBASIC3.57□□□□□ -1.84
Clp1Q99LI9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Clp1Q99LI9 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.56□□□□□ -1.84
Clp1Q99LI9 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.56□□□□□ -1.84
Clp1Q99LI9 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Clp1Q99LI9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm14389-201ENSMUST00000140453 241 ntBASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm23324-201ENSMUST00000157421 131 ntBASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm23182-201ENSMUST00000158688 135 ntBASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm28282-201ENSMUST00000186072 186 ntBASIC3.56□□□□□ -1.84
Clp1Q99LI9 Gm6003-201ENSMUST00000187903 463 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms