Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Mir343-201ENSMUST00000102360 75 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm14355-201ENSMUST00000117352 264 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm25109-201ENSMUST00000122474 114 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm14364-201ENSMUST00000129209 267 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm26278-201ENSMUST00000157098 132 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm24390-201ENSMUST00000179578 62 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Mir195b-201ENSMUST00000184814 97 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm29350-201ENSMUST00000189141 541 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
Chrna3Q8R4G9 Gm15214-201ENSMUST00000122155 470 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm23714-201ENSMUST00000179259 105 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm35558-203ENSMUST00000222264 204 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Gm26457-201ENSMUST00000082678 78 ntBASIC1.22□□□□□ -2.21
Chrna3Q8R4G9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm24865-201ENSMUST00000103246 96 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Mir743b-201ENSMUST00000104751 77 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm15443-201ENSMUST00000118947 820 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm25054-201ENSMUST00000157370 97 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm23390-201ENSMUST00000157393 106 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm26149-201ENSMUST00000157432 108 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm27510-201ENSMUST00000158214 64 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm26004-201ENSMUST00000158804 116 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm16038-201ENSMUST00000159317 193 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm44491-201ENSMUST00000196794 96 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm26493-201ENSMUST00000083155 136 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Mir211-201ENSMUST00000083651 106 ntBASIC1.21□□□□□ -2.22
Chrna3Q8R4G9 Gm26249-201ENSMUST00000116708 118 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm13457-201ENSMUST00000117885 267 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm24962-201ENSMUST00000157917 109 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm27421-201ENSMUST00000184729 167 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm34139-201ENSMUST00000196166 294 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm25820-201ENSMUST00000198589 127 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm23370-201ENSMUST00000199545 130 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm45456-201ENSMUST00000210841 243 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.2□□□□□ -2.22
Chrna3Q8R4G9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm22164-201ENSMUST00000158413 106 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm24668-201ENSMUST00000158935 104 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm17100-201ENSMUST00000168963 272 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Gm44142-201ENSMUST00000203358 311 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Chrna3Q8R4G9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Mir1967-201ENSMUST00000157789 82 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm24366-201ENSMUST00000175383 86 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm42774-201ENSMUST00000198854 283 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm35736-201ENSMUST00000203681 313 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Gm24623-201ENSMUST00000082616 194 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Snord96a-201ENSMUST00000082791 81 ntBASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
Chrna3Q8R4G9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Gm13153-201ENSMUST00000120969 637 ntBASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Gm8121-201ENSMUST00000153583 499 ntBASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Gm23557-201ENSMUST00000157820 138 ntBASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Gm26501-201ENSMUST00000178307 107 ntBASIC1.17□□□□□ -2.22
Chrna3Q8R4G9 Gm27385-201ENSMUST00000184747 104 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms