Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm21088-201ENSMUST00000190875 316 ntBASIC2.37□□□□□ -2.03
Rpp40Q8R1F9 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.37□□□□□ -2.03
Rpp40Q8R1F9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Rpp40Q8R1F9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.37□□□□□ -2.03
Rpp40Q8R1F9 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.37□□□□□ -2.03
Rpp40Q8R1F9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm24049-201ENSMUST00000102409 100 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Mir1898-201ENSMUST00000122643 83 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm23589-201ENSMUST00000157660 105 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm22535-201ENSMUST00000158174 119 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm24348-201ENSMUST00000158710 130 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Mir7661-201ENSMUST00000197023 61 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm43583-201ENSMUST00000199235 303 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm43978-201ENSMUST00000203491 451 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm44473-201ENSMUST00000204039 152 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Gm23845-201ENSMUST00000083834 152 ntBASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Rpp40Q8R1F9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm24858-201ENSMUST00000158058 323 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm16326-201ENSMUST00000162843 414 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm23355-201ENSMUST00000177614 107 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm24799-201ENSMUST00000178431 79 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm23148-201ENSMUST00000180367 107 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm28058-201ENSMUST00000186421 264 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm37801-201ENSMUST00000194754 274 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Mir7215-201ENSMUST00000200383 51 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm25258-201ENSMUST00000083049 107 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Rpp40Q8R1F9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm14774-201ENSMUST00000117857 536 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm13725-201ENSMUST00000122139 207 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm24847-201ENSMUST00000158032 108 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm25020-201ENSMUST00000178071 107 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm28724-201ENSMUST00000186149 625 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm29147-201ENSMUST00000186846 315 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm29227-201ENSMUST00000187139 315 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm29034-201ENSMUST00000188099 315 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm28160-201ENSMUST00000191229 315 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm37713-201ENSMUST00000191746 198 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm37129-201ENSMUST00000195791 315 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm42594-201ENSMUST00000199511 246 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm44429-201ENSMUST00000203542 186 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm18991-201ENSMUST00000209225 746 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Gm22062-201ENSMUST00000082563 107 ntBASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Rpp40Q8R1F9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Mir872-201ENSMUST00000104728 81 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm14001-201ENSMUST00000118847 247 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm24010-201ENSMUST00000157731 282 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Snord11-201ENSMUST00000158468 84 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm22093-201ENSMUST00000158980 111 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm27997-201ENSMUST00000184942 69 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm44182-201ENSMUST00000204052 115 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm24152-201ENSMUST00000082764 163 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Rpp40Q8R1F9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Mdga2-203ENSMUST00000113942 423 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm13711-201ENSMUST00000119708 453 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm24630-201ENSMUST00000122768 106 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm8121-201ENSMUST00000153583 499 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm28951-201ENSMUST00000190742 313 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm6109-201ENSMUST00000223297 348 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm23423-201ENSMUST00000082782 106 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm23055-201ENSMUST00000082805 94 ntBASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Rpp40Q8R1F9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Rpp40Q8R1F9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Rpp40Q8R1F9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms