Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.03□□□□□ -1.92
Vps53Q8CCB4 Gm24356-201ENSMUST00000082859 106 ntBASIC3.03□□□□□ -1.92
Vps53Q8CCB4 Gm22443-201ENSMUST00000082890 107 ntBASIC3.03□□□□□ -1.92
Vps53Q8CCB4 Gm22294-201ENSMUST00000083308 104 ntBASIC3.03□□□□□ -1.92
Vps53Q8CCB4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Vps53Q8CCB4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Vps53Q8CCB4 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Mir682-201ENSMUST00000102281 96 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm11460-201ENSMUST00000118200 361 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm22316-201ENSMUST00000158012 216 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm26024-201ENSMUST00000158657 322 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm22666-201ENSMUST00000158717 164 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm26287-201ENSMUST00000158887 81 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm23864-201ENSMUST00000177607 107 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Mir376a-201ENSMUST00000197584 68 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm45013-201ENSMUST00000206883 178 ntBASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Vps53Q8CCB4 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Vps53Q8CCB4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm23705-201ENSMUST00000104370 130 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm12155-201ENSMUST00000121267 160 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm22027-201ENSMUST00000122737 127 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm22315-201ENSMUST00000158010 143 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm23892-201ENSMUST00000158105 130 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm22433-201ENSMUST00000158550 142 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm24082-201ENSMUST00000175175 83 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm26494-201ENSMUST00000083154 143 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm24493-201ENSMUST00000083805 143 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm23847-201ENSMUST00000083829 110 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.01□□□□□ -1.93
Vps53Q8CCB4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Vps53Q8CCB4 Mdga2-203ENSMUST00000113942 423 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm23841-201ENSMUST00000116951 114 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm25805-201ENSMUST00000122788 108 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm24075-201ENSMUST00000158175 72 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3□□□□□ -1.93
Vps53Q8CCB4 Mir3075-201ENSMUST00000175340 85 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm22259-201ENSMUST00000178926 107 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Mir6402-201ENSMUST00000183406 80 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm20058-201ENSMUST00000186939 284 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm45508-201ENSMUST00000209298 299 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm6796-201ENSMUST00000211919 243 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Gm18346-201ENSMUST00000216782 325 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3□□□□□ -1.93
Vps53Q8CCB4 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3□□□□□ -1.93
Vps53Q8CCB4 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Vps53Q8CCB4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3□□□□□ -1.93
Vps53Q8CCB4 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Vps53Q8CCB4 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm25529-201ENSMUST00000104850 92 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm12417-201ENSMUST00000119153 403 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm29657-201ENSMUST00000189807 342 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm37807-201ENSMUST00000194310 190 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Mir378a-201ENSMUST00000198300 66 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Vps53Q8CCB4 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm6030-201ENSMUST00000078768 402 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Mir127-201ENSMUST00000093568 70 ntBASIC2.99□□□□□ -1.93
Vps53Q8CCB4 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm24116-201ENSMUST00000103975 107 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm15846-201ENSMUST00000116022 320 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm15162-201ENSMUST00000119325 283 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm22321-201ENSMUST00000157152 104 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm23640-201ENSMUST00000157860 104 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm24601-201ENSMUST00000157970 143 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm25476-201ENSMUST00000175125 185 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm23190-201ENSMUST00000180307 64 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm27582-201ENSMUST00000184084 126 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Mir465d-201ENSMUST00000196314 58 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm26225-201ENSMUST00000082508 135 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm24698-201ENSMUST00000083883 130 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Vps53Q8CCB4 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm24582-201ENSMUST00000103967 103 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm24867-201ENSMUST00000104161 107 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm23982-201ENSMUST00000157141 106 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm24716-201ENSMUST00000157524 104 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm25454-201ENSMUST00000157947 315 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm25863-201ENSMUST00000158249 329 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm24878-201ENSMUST00000158782 104 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm27803-201ENSMUST00000183763 119 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm27421-201ENSMUST00000184729 167 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Trbv6-201ENSMUST00000193743 276 ntBASIC2.97□□□□□ -1.93
Vps53Q8CCB4 Gm44429-201ENSMUST00000203542 186 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms