Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm8219-201ENSMUST00000218309 242 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm22454-201ENSMUST00000082583 107 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim47Q8C0E3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm14491-201ENSMUST00000121919 199 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm23957-201ENSMUST00000157209 90 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm23234-201ENSMUST00000157304 134 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm24718-201ENSMUST00000157521 136 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm25860-201ENSMUST00000158252 126 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm28155-201ENSMUST00000191066 151 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm37698-201ENSMUST00000192605 463 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm44564-201ENSMUST00000207985 180 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm45245-201ENSMUST00000210082 376 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gm22738-201ENSMUST00000083440 147 ntBASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim47Q8C0E3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim47Q8C0E3 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim47Q8C0E3 Snord14c-201ENSMUST00000101927 86 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Gm22713-201ENSMUST00000116895 130 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Gm14923-201ENSMUST00000118270 155 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Gm26020-201ENSMUST00000122729 183 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Gm24246-201ENSMUST00000157315 132 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Gm27396-201ENSMUST00000157708 58 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Mir1934-201ENSMUST00000158127 83 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim47Q8C0E3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Mir6370-201ENSMUST00000183510 120 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 AC159188.1-201ENSMUST00000225198 526 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Mir201-201ENSMUST00000083470 66 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim47Q8C0E3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC4□□□□□ -1.77
Trim47Q8C0E3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim47Q8C0E3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Gm25272-201ENSMUST00000104293 128 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Gm15289-201ENSMUST00000117793 244 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Gm24008-201ENSMUST00000157733 138 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Gm24625-201ENSMUST00000082622 130 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Gm25800-201ENSMUST00000082636 134 ntBASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim47Q8C0E3 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm22281-201ENSMUST00000157198 103 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm25882-201ENSMUST00000157784 85 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm23666-201ENSMUST00000158053 116 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm23194-201ENSMUST00000158813 105 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm26141-201ENSMUST00000175299 126 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Mir7578-201ENSMUST00000183455 82 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim47Q8C0E3 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm24582-201ENSMUST00000103967 103 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm26387-201ENSMUST00000104238 132 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm13155-201ENSMUST00000119277 646 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm8178-201ENSMUST00000121570 646 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm22790-201ENSMUST00000157229 129 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm23895-201ENSMUST00000158108 160 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Mir1936-201ENSMUST00000158699 93 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm25198-201ENSMUST00000178574 110 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Gm22304-201ENSMUST00000082688 129 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Mir208a-201ENSMUST00000083498 83 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Mir101b-201ENSMUST00000083622 97 ntBASIC3.97□□□□□ -1.77
Trim47Q8C0E3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms