Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Trbv18-201ENSMUST00000194256 294 ntBASIC3.45□□□□□ -1.86
Sh3rf1Q69ZI1 Gm18000-201ENSMUST00000212153 800 ntBASIC3.45□□□□□ -1.86
Sh3rf1Q69ZI1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.45□□□□□ -1.86
Sh3rf1Q69ZI1 Gm10161-201ENSMUST00000091506 204 ntBASIC3.45□□□□□ -1.86
Sh3rf1Q69ZI1 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Sh3rf1Q69ZI1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sh3rf1Q69ZI1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23530-201ENSMUST00000104564 137 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm26249-201ENSMUST00000116708 118 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm11460-201ENSMUST00000118200 361 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23755-201ENSMUST00000157578 343 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm27592-201ENSMUST00000157729 126 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22516-201ENSMUST00000158266 124 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22174-201ENSMUST00000175050 125 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22692-201ENSMUST00000175055 125 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm27634-201ENSMUST00000175060 126 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22460-201ENSMUST00000175269 124 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm24365-201ENSMUST00000175384 125 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm44310-201ENSMUST00000175424 126 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22639-201ENSMUST00000175591 125 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm24979-201ENSMUST00000178626 126 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Mir669j-201ENSMUST00000179023 121 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Mir6371-201ENSMUST00000184470 111 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm27743-201ENSMUST00000185136 126 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm24533-201ENSMUST00000083138 196 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm24892-201ENSMUST00000122747 104 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22034-201ENSMUST00000157283 134 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23101-201ENSMUST00000157550 137 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23589-201ENSMUST00000157660 105 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm25519-201ENSMUST00000158392 127 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22429-201ENSMUST00000158553 130 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Mir6370-201ENSMUST00000183510 120 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm18486-201ENSMUST00000184040 298 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm27648-201ENSMUST00000184315 107 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22299-201ENSMUST00000082663 136 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Mir208a-201ENSMUST00000083498 83 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm25630-201ENSMUST00000084000 162 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Sh3rf1Q69ZI1 Gm13761-201ENSMUST00000117238 807 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm7123-201ENSMUST00000117647 213 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm13167-201ENSMUST00000118554 578 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23230-201ENSMUST00000157298 133 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23671-201ENSMUST00000157472 103 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm28409-201ENSMUST00000187064 103 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm26265-202ENSMUST00000196326 133 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm42834-201ENSMUST00000196845 256 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.42□□□□□ -1.86
Sh3rf1Q69ZI1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm23609-201ENSMUST00000104542 127 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm22586-201ENSMUST00000157507 122 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm7592-201ENSMUST00000160674 627 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm27249-201ENSMUST00000185049 328 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm29604-201ENSMUST00000187176 163 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm43676-201ENSMUST00000197532 540 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm44524-201ENSMUST00000203899 271 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm44084-201ENSMUST00000203947 409 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm43898-201ENSMUST00000204456 424 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Sh3rf1Q69ZI1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Sh3rf1Q69ZI1 Snord14c-201ENSMUST00000101927 86 ntBASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Sh3rf1Q69ZI1 Gm14973-201ENSMUST00000117248 255 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms