Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm44960-201ENSMUST00000207403 141 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm45673-201ENSMUST00000210293 358 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Gm25512-201ENSMUST00000083863 107 ntBASIC2.02□□□□□ -2.09
Sdc3Q64519 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm26500-201ENSMUST00000101867 106 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm11859-201ENSMUST00000118099 455 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm24900-201ENSMUST00000158128 134 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm22093-201ENSMUST00000158980 111 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm25284-201ENSMUST00000180345 141 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm29005-201ENSMUST00000186773 320 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm44063-201ENSMUST00000203307 376 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.01□□□□□ -2.09
Sdc3Q64519 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm25589-201ENSMUST00000082502 166 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm23412-201ENSMUST00000083017 107 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm25124-201ENSMUST00000083345 164 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm25937-201ENSMUST00000083912 107 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm26111-201ENSMUST00000083969 106 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Sdc3Q64519 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.01□□□□□ -2.09
Sdc3Q64519 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2□□□□□ -2.09
Sdc3Q64519 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Sdc3Q64519 Gm25094-201ENSMUST00000103992 131 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm26077-201ENSMUST00000104064 123 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm13432-201ENSMUST00000118861 241 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm24598-201ENSMUST00000122510 74 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm22113-201ENSMUST00000158343 104 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm16561-201ENSMUST00000163001 192 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm20613-201ENSMUST00000175828 345 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm28016-201ENSMUST00000184594 196 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm28058-201ENSMUST00000186421 264 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm43865-201ENSMUST00000204721 127 ntBASIC2□□□□□ -2.09
Sdc3Q64519 AC183096.2-201ENSMUST00000228733 457 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm25079-201ENSMUST00000082529 203 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm22685-201ENSMUST00000082848 106 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Mir300-201ENSMUST00000083485 79 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm23345-201ENSMUST00000083817 150 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Mir496a-201ENSMUST00000093627 79 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Gm43753-201ENSMUST00000196539 3309 ntBASIC2□□□□□ -2.09
Sdc3Q64519 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Sdc3Q64519 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm16362-201ENSMUST00000135189 214 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm16358-201ENSMUST00000146046 210 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm23262-201ENSMUST00000158323 168 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm28848-201ENSMUST00000189984 168 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.99□□□□□ -2.09
Sdc3Q64519 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.99□□□□□ -2.09
Sdc3Q64519 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.99□□□□□ -2.09
Sdc3Q64519 Gm23142-201ENSMUST00000101848 105 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm26240-201ENSMUST00000101893 105 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm26249-201ENSMUST00000116708 118 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm22713-201ENSMUST00000116895 130 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm14894-201ENSMUST00000117170 270 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm11935-201ENSMUST00000118608 399 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm22598-201ENSMUST00000157600 127 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm24237-201ENSMUST00000157790 132 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm27640-201ENSMUST00000184580 147 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm28288-201ENSMUST00000191019 214 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm37449-201ENSMUST00000193016 270 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm18658-201ENSMUST00000195558 270 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm44429-201ENSMUST00000203542 186 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm26175-201ENSMUST00000083794 131 ntBASIC1.98□□□□□ -2.09
Sdc3Q64519 Gm24984-201ENSMUST00000104454 133 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Gm12785-201ENSMUST00000122052 172 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
Sdc3Q64519 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Gm44482-201ENSMUST00000199232 103 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.97□□□□□ -2.09
Sdc3Q64519 Gm44654-201ENSMUST00000208052 329 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Gm18617-201ENSMUST00000222311 259 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Gm22978-201ENSMUST00000082607 160 ntBASIC1.97□□□□□ -2.09
Sdc3Q64519 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Sdc3Q64519 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm15215-201ENSMUST00000117773 489 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm24896-201ENSMUST00000122741 135 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm15281-201ENSMUST00000125181 351 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm23983-201ENSMUST00000157142 114 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm22434-201ENSMUST00000158549 122 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm22242-201ENSMUST00000175224 118 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm24308-201ENSMUST00000177773 114 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Mir7226-201ENSMUST00000184953 60 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm28257-201ENSMUST00000185244 463 ntBASIC1.96□□□□□ -2.1
Sdc3Q64519 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms