Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim28Q62318 Gm22651-201ENSMUST00000157872 94 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm25716-201ENSMUST00000158628 104 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm24885-201ENSMUST00000158783 270 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim28Q62318 Gm17100-201ENSMUST00000168963 272 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm25121-201ENSMUST00000179846 79 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm27698-201ENSMUST00000184060 249 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm30341-201ENSMUST00000194363 289 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm37417-201ENSMUST00000195257 454 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm18982-201ENSMUST00000198118 529 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm18991-201ENSMUST00000209225 746 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm24204-201ENSMUST00000082950 107 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Gm23039-201ENSMUST00000083870 161 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Trim28Q62318 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.37□□□□□ -1.87
Trim28Q62318 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim28Q62318 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim28Q62318 Gm22027-201ENSMUST00000122737 127 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim28Q62318 Gm22447-201ENSMUST00000158155 92 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Mir3092-201ENSMUST00000174954 96 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Gm37162-201ENSMUST00000191708 551 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Gm42855-201ENSMUST00000197388 253 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim28Q62318 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Gm7065-201ENSMUST00000222150 474 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Gm26314-201ENSMUST00000083891 107 ntBASIC3.36□□□□□ -1.87
Trim28Q62318 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim28Q62318 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim28Q62318 Gm15896-201ENSMUST00000118045 440 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Gm11785-201ENSMUST00000120165 601 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Gm22321-201ENSMUST00000157152 104 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Gm27330-201ENSMUST00000184689 132 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Gm38311-201ENSMUST00000192945 165 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.35□□□□□ -1.87
Trim28Q62318 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.35□□□□□ -1.87
Trim28Q62318 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Mir302d-201ENSMUST00000083513 66 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.35□□□□□ -1.87
Trim28Q62318 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim28Q62318 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim28Q62318 Gm22752-201ENSMUST00000102083 109 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trim28Q62318 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm11356-201ENSMUST00000118974 192 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm24594-201ENSMUST00000122502 99 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim28Q62318 Gm25220-201ENSMUST00000157546 95 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm23641-201ENSMUST00000157857 101 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm16289-201ENSMUST00000162079 183 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm23239-201ENSMUST00000083006 181 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 Gm25411-201ENSMUST00000083760 151 ntBASIC3.34□□□□□ -1.87
Trim28Q62318 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim28Q62318 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trim28Q62318 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.34□□□□□ -1.88
Trim28Q62318 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.34□□□□□ -1.88
Trim28Q62318 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim28Q62318 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim28Q62318 Gm14020-201ENSMUST00000118165 662 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Gm11285-201ENSMUST00000118443 322 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Gm3788-201ENSMUST00000119949 136 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Gm11204-201ENSMUST00000122438 147 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Gm25115-201ENSMUST00000157187 140 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Gm22699-201ENSMUST00000175376 105 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Gm19257-201ENSMUST00000186121 183 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim28Q62318 Gm19901-201ENSMUST00000192191 495 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.33□□□□□ -1.88
Trim28Q62318 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm15282-201ENSMUST00000117707 300 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm13862-201ENSMUST00000121220 197 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim28Q62318 Gm23600-201ENSMUST00000157260 71 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm22654-201ENSMUST00000157874 105 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm23044-201ENSMUST00000157891 100 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm24075-201ENSMUST00000158175 72 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm24308-201ENSMUST00000177773 114 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.32□□□□□ -1.88
Trim28Q62318 Gm44256-201ENSMUST00000203304 335 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm18346-201ENSMUST00000216782 325 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Gm23517-201ENSMUST00000082830 192 ntBASIC3.32□□□□□ -1.88
Trim28Q62318 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim28Q62318 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim28Q62318 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim28Q62318 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim28Q62318 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim28Q62318 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Trim28Q62318 Gm23889-201ENSMUST00000122689 104 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm12238-201ENSMUST00000127764 124 ntBASIC3.31□□□□□ -1.88
Trim28Q62318 Gm25391-201ENSMUST00000157342 134 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms