Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm24773-201ENSMUST00000158513 99 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Mir6896-201ENSMUST00000198033 73 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Gm38395-201ENSMUST00000199904 830 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Mir101a-201ENSMUST00000083517 83 ntBASIC0.12□□□□□ -2.39
Trav6d-4Q5R1I0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm14362-201ENSMUST00000121679 273 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm15254-201ENSMUST00000149567 273 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm26435-201ENSMUST00000179026 107 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Mir6365-201ENSMUST00000183990 101 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm44358-201ENSMUST00000196301 98 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm42855-201ENSMUST00000197388 253 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm43026-201ENSMUST00000202972 325 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm23347-201ENSMUST00000083823 82 ntBASIC0.11□□□□□ -2.39
Trav6d-4Q5R1I0 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.1□□□□□ -2.39
Trav6d-4Q5R1I0 Gm27402-201ENSMUST00000183890 120 ntBASIC0.1□□□□□ -2.39
Trav6d-4Q5R1I0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.1□□□□□ -2.39
Trav6d-4Q5R1I0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.1□□□□□ -2.39
Trav6d-4Q5R1I0 Gm24615-201ENSMUST00000083268 113 ntBASIC0.1□□□□□ -2.39
Trav6d-4Q5R1I0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.09□□□□□ -2.39
Trav6d-4Q5R1I0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23589-201ENSMUST00000157660 105 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm24390-201ENSMUST00000179578 62 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Mir6411-201ENSMUST00000183556 108 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm18667-201ENSMUST00000186523 484 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm5010-201ENSMUST00000213131 260 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23140-201ENSMUST00000082487 107 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.09□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm11859-201ENSMUST00000118099 455 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14269-201ENSMUST00000120455 306 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm15177-201ENSMUST00000120491 577 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm22983-201ENSMUST00000158308 104 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm28921-201ENSMUST00000190219 378 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm37361-201ENSMUST00000194345 132 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Gm43004-201ENSMUST00000201872 703 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.08□□□□□ -2.4
Trav6d-4Q5R1I0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm11792-201ENSMUST00000120640 168 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm12881-201ENSMUST00000121191 203 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23829-201ENSMUST00000157392 270 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23587-201ENSMUST00000157658 84 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm23761-201ENSMUST00000158347 104 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm24137-201ENSMUST00000180055 79 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm22263-201ENSMUST00000180060 104 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm22391-201ENSMUST00000180356 79 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm28412-201ENSMUST00000187243 177 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm7495-201ENSMUST00000215099 426 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm26263-201ENSMUST00000083281 164 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.07□□□□□ -2.4
Trav6d-4Q5R1I0 Mir883a-201ENSMUST00000104824 76 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm22633-201ENSMUST00000179834 107 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm44211-201ENSMUST00000204867 145 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm44921-201ENSMUST00000205290 301 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm8219-201ENSMUST00000218309 242 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav6d-4Q5R1I0 Gm26339-201ENSMUST00000102368 99 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14359-201ENSMUST00000118883 424 ntBASIC0.05□□□□□ -2.4
Trav6d-4Q5R1I0 Gm14551-201ENSMUST00000120802 256 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms