Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm23010-201ENSMUST00000104151 126 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm14073-201ENSMUST00000117344 381 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm12417-201ENSMUST00000119153 403 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm15162-201ENSMUST00000119325 283 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm25805-201ENSMUST00000122788 108 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm22321-201ENSMUST00000157152 104 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm25235-201ENSMUST00000179933 107 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Mir7667-201ENSMUST00000183866 63 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm42739-201ENSMUST00000200687 226 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Gm24457-201ENSMUST00000083196 105 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.35□□□□□ -1.87
Rnf180Q3U827 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.34□□□□□ -1.87
Rnf180Q3U827 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm24116-201ENSMUST00000103975 107 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm24867-201ENSMUST00000104161 107 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm15846-201ENSMUST00000116022 320 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm11460-201ENSMUST00000118200 361 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm16355-201ENSMUST00000128606 231 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm27421-201ENSMUST00000184729 167 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm28453-203ENSMUST00000187041 189 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm19123-201ENSMUST00000190716 651 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Mir465d-201ENSMUST00000196314 58 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.34□□□□□ -1.87
Rnf180Q3U827 Mir3087-201ENSMUST00000199405 56 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Rnf180Q3U827 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.34□□□□□ -1.87
Rnf180Q3U827 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Rnf180Q3U827 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Rnf180Q3U827 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.34□□□□□ -1.88
Rnf180Q3U827 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm22784-201ENSMUST00000104088 132 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm12721-201ENSMUST00000120621 268 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm18433-202ENSMUST00000195682 196 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm43264-201ENSMUST00000202284 325 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.33□□□□□ -1.88
Rnf180Q3U827 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf180Q3U827 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Rnf180Q3U827 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm24582-201ENSMUST00000103967 103 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Snord72-201ENSMUST00000104549 81 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm14803-201ENSMUST00000117163 361 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm23982-201ENSMUST00000157141 106 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm23716-201ENSMUST00000157348 144 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm22145-201ENSMUST00000157396 148 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm25454-201ENSMUST00000157947 315 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm24392-201ENSMUST00000158136 103 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm23760-201ENSMUST00000158350 116 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm24667-201ENSMUST00000158938 103 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm2962-201ENSMUST00000159266 336 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm27699-201ENSMUST00000183553 180 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Mir6540-201ENSMUST00000184886 108 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.32□□□□□ -1.88
Rnf180Q3U827 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.32□□□□□ -1.88
Rnf180Q3U827 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Rnf180Q3U827 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf180Q3U827 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf180Q3U827 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Rnf180Q3U827 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm22658-201ENSMUST00000104196 155 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm24908-201ENSMUST00000157294 127 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm22450-201ENSMUST00000179641 107 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm25024-201ENSMUST00000179667 104 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm25473-201ENSMUST00000180191 107 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm18486-201ENSMUST00000184040 298 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm44533-201ENSMUST00000207782 268 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm24856-201ENSMUST00000082809 107 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm26071-201ENSMUST00000083261 107 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm24521-201ENSMUST00000083958 107 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Rnf180Q3U827 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.31□□□□□ -1.88
Rnf180Q3U827 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Rnf180Q3U827 Mir1b-201ENSMUST00000117012 122 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm14838-201ENSMUST00000118913 248 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm23325-201ENSMUST00000157422 129 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Trbv6-201ENSMUST00000193743 276 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm37579-201ENSMUST00000194291 142 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.3□□□□□ -1.88
Rnf180Q3U827 Gm45288-201ENSMUST00000210236 151 ntBASIC3.3□□□□□ -1.88
Rnf180Q3U827 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 125.5 ms