Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col28a1Q2UY11 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm25421-201ENSMUST00000104218 164 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm14803-201ENSMUST00000117163 361 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm12213-201ENSMUST00000119924 353 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm23466-201ENSMUST00000157133 106 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Mir1942-201ENSMUST00000157274 63 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm22989-201ENSMUST00000158313 86 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm24082-201ENSMUST00000175175 83 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm25071-201ENSMUST00000175232 70 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm23268-201ENSMUST00000175494 78 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm27470-201ENSMUST00000184070 210 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm44337-201ENSMUST00000196553 114 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm44320-201ENSMUST00000199276 86 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm18346-201ENSMUST00000216782 325 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm40810-201ENSMUST00000219149 253 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Col28a1Q2UY11 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm10025-201ENSMUST00000079568 372 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Gm25930-201ENSMUST00000082785 107 ntBASIC2.59□□□□□ -1.99
Col28a1Q2UY11 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Col28a1Q2UY11 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm24282-201ENSMUST00000104232 66 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm11204-201ENSMUST00000122438 147 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm25599-201ENSMUST00000157816 103 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm24436-201ENSMUST00000157889 302 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm25707-201ENSMUST00000175120 96 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm27285-201ENSMUST00000183875 127 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm27786-201ENSMUST00000184337 70 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm38238-201ENSMUST00000194334 346 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm18341-201ENSMUST00000197538 622 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm43521-201ENSMUST00000197838 255 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm43107-201ENSMUST00000198729 255 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.58□□□□□ -2
Col28a1Q2UY11 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Gm24204-201ENSMUST00000082950 107 ntBASIC2.58□□□□□ -2
Col28a1Q2UY11 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col28a1Q2UY11 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Col28a1Q2UY11 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col28a1Q2UY11 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col28a1Q2UY11 Mir466p-201ENSMUST00000103925 89 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Mir872-201ENSMUST00000104728 81 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm24605-201ENSMUST00000104772 96 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm15282-201ENSMUST00000117707 300 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm25805-201ENSMUST00000122788 108 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm23584-201ENSMUST00000157655 129 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Mir7068-201ENSMUST00000183439 74 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Mir6353-201ENSMUST00000183596 113 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm28848-201ENSMUST00000189984 168 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm43193-201ENSMUST00000197732 441 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm44922-201ENSMUST00000206690 90 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm22620-201ENSMUST00000082700 133 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.57□□□□□ -2
Col28a1Q2UY11 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Col28a1Q2UY11 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col28a1Q2UY11 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col28a1Q2UY11 Snora36b-201ENSMUST00000104383 132 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Mdga2-203ENSMUST00000113942 423 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Gm14593-201ENSMUST00000119948 294 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Gm5396-201ENSMUST00000121222 532 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Gm22537-201ENSMUST00000158172 199 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Gm22500-201ENSMUST00000158982 99 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Gm7329-201ENSMUST00000185915 210 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Gm9377-201ENSMUST00000207227 623 ntBASIC2.56□□□□□ -2
Col28a1Q2UY11 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col28a1Q2UY11 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Col28a1Q2UY11 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col28a1Q2UY11 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col28a1Q2UY11 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col28a1Q2UY11 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm13432-201ENSMUST00000118861 241 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm14629-201ENSMUST00000122428 144 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 DQ267100-201ENSMUST00000122600 72 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm26275-201ENSMUST00000157101 268 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm25280-201ENSMUST00000157269 101 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm23713-201ENSMUST00000157353 70 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm22217-201ENSMUST00000157556 313 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Mir1967-201ENSMUST00000157789 82 ntBASIC2.55□□□□□ -2
Col28a1Q2UY11 Gm22615-201ENSMUST00000158102 70 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms