Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37037-201ENSMUST00000194475 424 ntBASIC2.27□□□□□ -2.05
NcanP55066 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.27□□□□□ -2.05
NcanP55066 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm44459-201ENSMUST00000203926 160 ntBASIC2.27□□□□□ -2.05
NcanP55066 Gm44533-201ENSMUST00000207782 268 ntBASIC2.27□□□□□ -2.05
NcanP55066 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.27□□□□□ -2.05
NcanP55066 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.27□□□□□ -2.05
NcanP55066 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.27□□□□□ -2.05
NcanP55066 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.27□□□□□ -2.05
NcanP55066 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.27□□□□□ -2.05
NcanP55066 Snord68-201ENSMUST00000082516 86 ntBASIC2.27□□□□□ -2.05
NcanP55066 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
NcanP55066 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
NcanP55066 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.26□□□□□ -2.05
NcanP55066 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NcanP55066 Gm23599-201ENSMUST00000157261 251 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm24225-201ENSMUST00000158825 98 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm28200-201ENSMUST00000187778 315 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm29378-201ENSMUST00000188723 315 ntBASIC2.26□□□□□ -2.05
NcanP55066 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm28909-201ENSMUST00000189406 315 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm45403-201ENSMUST00000209453 276 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm40810-201ENSMUST00000219149 253 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm26457-201ENSMUST00000082678 78 ntBASIC2.26□□□□□ -2.05
NcanP55066 Gm25651-201ENSMUST00000083782 119 ntBASIC2.26□□□□□ -2.05
NcanP55066 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
NcanP55066 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.26□□□□□ -2.05
NcanP55066 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NcanP55066 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
NcanP55066 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.25□□□□□ -2.05
NcanP55066 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NcanP55066 Gm14296-202ENSMUST00000108931 750 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm13672-201ENSMUST00000117554 459 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm11854-201ENSMUST00000117839 446 ntBASIC2.25□□□□□ -2.05
NcanP55066 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm24911-201ENSMUST00000157292 136 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm23331-201ENSMUST00000157423 108 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm26345-201ENSMUST00000157534 120 ntBASIC2.25□□□□□ -2.05
NcanP55066 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.25□□□□□ -2.05
NcanP55066 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm23003-201ENSMUST00000179948 107 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm25284-201ENSMUST00000180345 141 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm28008-201ENSMUST00000184021 186 ntBASIC2.25□□□□□ -2.05
NcanP55066 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.25□□□□□ -2.05
NcanP55066 Gm44478-201ENSMUST00000204875 114 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.25□□□□□ -2.05
NcanP55066 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.25□□□□□ -2.05
NcanP55066 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm24460-201ENSMUST00000082731 106 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm25628-201ENSMUST00000084002 105 ntBASIC2.25□□□□□ -2.05
NcanP55066 Gm6954-201ENSMUST00000117416 225 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm13518-201ENSMUST00000120018 233 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm14761-201ENSMUST00000121363 262 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.24□□□□□ -2.05
NcanP55066 Gm22216-201ENSMUST00000157557 114 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm22945-201ENSMUST00000158557 157 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm22929-201ENSMUST00000175517 107 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm25121-201ENSMUST00000179846 79 ntBASIC2.24□□□□□ -2.05
NcanP55066 Mir7052-201ENSMUST00000184821 65 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm28717-201ENSMUST00000189950 315 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm19123-201ENSMUST00000190716 651 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm38019-201ENSMUST00000195133 380 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm44881-201ENSMUST00000205425 367 ntBASIC2.24□□□□□ -2.05
NcanP55066 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.24□□□□□ -2.05
NcanP55066 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.24□□□□□ -2.05
NcanP55066 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.24□□□□□ -2.05
NcanP55066 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NcanP55066 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NcanP55066 Gm11798-201ENSMUST00000119150 421 ntBASIC2.23□□□□□ -2.05
NcanP55066 Gm37923-201ENSMUST00000191624 161 ntBASIC2.23□□□□□ -2.05
NcanP55066 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.23□□□□□ -2.05
NcanP55066 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.23□□□□□ -2.05
NcanP55066 Mir3068-202ENSMUST00000197755 79 ntBASIC2.23□□□□□ -2.05
NcanP55066 Gm42594-201ENSMUST00000199511 246 ntBASIC2.23□□□□□ -2.05
NcanP55066 Gm44063-201ENSMUST00000203307 376 ntBASIC2.23□□□□□ -2.05
NcanP55066 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.23□□□□□ -2.05
NcanP55066 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.23□□□□□ -2.05
NcanP55066 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NcanP55066 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
NcanP55066 Gm23202-201ENSMUST00000104376 129 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm13378-201ENSMUST00000117483 336 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm13396-201ENSMUST00000120617 271 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm14770-201ENSMUST00000122197 312 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm16328-201ENSMUST00000126985 196 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm25454-201ENSMUST00000157947 315 ntBASIC2.22□□□□□ -2.05
NcanP55066 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NcanP55066 Gm24813-201ENSMUST00000175310 84 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm22308-201ENSMUST00000177609 107 ntBASIC2.22□□□□□ -2.05
NcanP55066 Mir6346-201ENSMUST00000183982 81 ntBASIC2.22□□□□□ -2.05
NcanP55066 Mir7059-201ENSMUST00000184825 59 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm28408-201ENSMUST00000191557 463 ntBASIC2.22□□□□□ -2.05
NcanP55066 Mir6962-201ENSMUST00000199512 63 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.22□□□□□ -2.05
NcanP55066 Gm44811-201ENSMUST00000209120 228 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm45445-201ENSMUST00000209586 232 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm22997-201ENSMUST00000082845 107 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm26126-201ENSMUST00000083188 164 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm25896-201ENSMUST00000083713 136 ntBASIC2.22□□□□□ -2.05
NcanP55066 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.22□□□□□ -2.05
NcanP55066 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms