Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm44182-201ENSMUST00000204052 115 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 Gm45002-201ENSMUST00000208045 120 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 Snord47-201ENSMUST00000083034 77 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 Gm25632-201ENSMUST00000083112 85 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 Gm23845-201ENSMUST00000083834 152 ntBASIC2.03□□□□□ -2.08
Nkx2-1P50220 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Nkx2-1P50220 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Nkx2-1P50220 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Nkx2-1P50220 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm26500-201ENSMUST00000101867 106 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm24982-201ENSMUST00000104456 132 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm15526-201ENSMUST00000112504 204 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm13729-201ENSMUST00000120328 406 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm14775-201ENSMUST00000122089 310 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm16355-201ENSMUST00000128606 231 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm22814-201ENSMUST00000157452 104 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm23589-201ENSMUST00000157660 105 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm23642-201ENSMUST00000157858 258 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm3027-201ENSMUST00000167579 451 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm24085-201ENSMUST00000175172 116 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Mir7047-201ENSMUST00000184595 64 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Trbv18-201ENSMUST00000194256 294 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm44322-201ENSMUST00000196830 115 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Mir7232-201ENSMUST00000197929 74 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Nkx2-1P50220 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm45403-201ENSMUST00000209453 276 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm10025-201ENSMUST00000079568 372 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm22973-201ENSMUST00000083298 191 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm22744-201ENSMUST00000083444 65 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm25896-201ENSMUST00000083713 136 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Nkx2-1P50220 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm24049-201ENSMUST00000102409 100 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm25915-201ENSMUST00000104265 126 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm23705-201ENSMUST00000104370 130 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm11935-201ENSMUST00000118608 399 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm25956-201ENSMUST00000175115 217 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm22308-201ENSMUST00000177609 107 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Mir3069-201ENSMUST00000198802 65 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm40810-201ENSMUST00000219149 253 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm6109-201ENSMUST00000223297 348 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm22249-201ENSMUST00000082485 136 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm25628-201ENSMUST00000084002 105 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.01□□□□□ -2.09
Nkx2-1P50220 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.01□□□□□ -2.09
Nkx2-1P50220 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Nkx2-1P50220 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Nkx2-1P50220 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Nkx2-1P50220 Gm8935-202ENSMUST00000105727 1959 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Mir1193-201ENSMUST00000116761 121 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm16032-201ENSMUST00000118534 168 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm22482-201ENSMUST00000122563 359 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm14298-201ENSMUST00000139032 237 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm16356-201ENSMUST00000143300 169 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm25054-201ENSMUST00000157370 97 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm23120-201ENSMUST00000157654 287 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm23381-201ENSMUST00000157676 94 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm24958-201ENSMUST00000158009 97 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm24212-201ENSMUST00000158258 132 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm25528-201ENSMUST00000180264 132 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm45119-201ENSMUST00000207612 199 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 AC150314.1-201ENSMUST00000214798 238 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm33654-201ENSMUST00000221704 215 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2□□□□□ -2.09
Nkx2-1P50220 Gm22062-201ENSMUST00000082563 107 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm23453-201ENSMUST00000083326 106 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Gm44114-201ENSMUST00000203270 2727 ntBASIC2□□□□□ -2.09
Nkx2-1P50220 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Nkx2-1P50220 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Nkx2-1P50220 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Nkx2-1P50220 Gm13885-201ENSMUST00000117569 187 ntBASIC1.99□□□□□ -2.09
Nkx2-1P50220 Gm12647-201ENSMUST00000118977 265 ntBASIC1.99□□□□□ -2.09
Nkx2-1P50220 Trav20-201ENSMUST00000142754 347 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms