Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.15□□□□□ -1.91
Usp4P35123 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Usp4P35123 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.14□□□□□ -1.91
Usp4P35123 Gm25373-201ENSMUST00000158156 115 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usp4P35123 Mir7081-201ENSMUST00000184490 75 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Gm26265-202ENSMUST00000196326 133 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Gm43993-201ENSMUST00000203972 247 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Gm44964-201ENSMUST00000207011 273 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Gm9370-201ENSMUST00000222787 609 ntBASIC3.14□□□□□ -1.91
Usp4P35123 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Gm25081-201ENSMUST00000082534 108 ntBASIC3.14□□□□□ -1.91
Usp4P35123 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usp4P35123 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Usp4P35123 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Usp4P35123 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usp4P35123 Gm12550-201ENSMUST00000118478 329 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm12351-201ENSMUST00000118727 292 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm15190-201ENSMUST00000120855 276 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.13□□□□□ -1.91
Usp4P35123 Gm23668-201ENSMUST00000157465 111 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm25599-201ENSMUST00000157816 103 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm25223-201ENSMUST00000158200 110 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm25470-201ENSMUST00000175576 111 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm29602-201ENSMUST00000186887 442 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.13□□□□□ -1.91
Usp4P35123 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Gm18213-201ENSMUST00000207850 178 ntBASIC3.13□□□□□ -1.91
Usp4P35123 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.13□□□□□ -1.91
Usp4P35123 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.13□□□□□ -1.91
Usp4P35123 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Usp4P35123 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Usp4P35123 Mir302d-201ENSMUST00000083513 66 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Usp4P35123 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Usp4P35123 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.13□□□□□ -1.91
Usp4P35123 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Usp4P35123 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp4P35123 Gm22939-201ENSMUST00000103958 131 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm16171-201ENSMUST00000118004 324 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm3788-201ENSMUST00000119949 136 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp4P35123 Gm26215-201ENSMUST00000158584 139 ntBASIC3.12□□□□□ -1.91
Usp4P35123 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm25457-201ENSMUST00000179509 107 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm27893-201ENSMUST00000184408 194 ntBASIC3.12□□□□□ -1.91
Usp4P35123 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm44352-201ENSMUST00000196358 110 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm46993-201ENSMUST00000220708 259 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Snora19-201ENSMUST00000082962 132 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Gm23658-201ENSMUST00000083233 132 ntBASIC3.12□□□□□ -1.91
Usp4P35123 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Usp4P35123 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp4P35123 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Usp4P35123 Gm12213-201ENSMUST00000119924 353 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm23535-201ENSMUST00000157542 106 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm24015-201ENSMUST00000157725 232 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm22989-201ENSMUST00000158313 86 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm24131-201ENSMUST00000158539 107 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm23933-201ENSMUST00000178405 79 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm37281-201ENSMUST00000192412 439 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm44393-201ENSMUST00000197418 138 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.11□□□□□ -1.91
Usp4P35123 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.11□□□□□ -1.91
Usp4P35123 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm23723-201ENSMUST00000082996 132 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Gm25789-201ENSMUST00000083294 76 ntBASIC3.11□□□□□ -1.91
Usp4P35123 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp4P35123 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp4P35123 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Usp4P35123 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp4P35123 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp4P35123 Gm24119-201ENSMUST00000103979 246 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm14448-201ENSMUST00000116383 210 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm25539-201ENSMUST00000116886 122 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm11356-201ENSMUST00000118974 192 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.1□□□□□ -1.91
Usp4P35123 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm25625-201ENSMUST00000157221 96 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm24440-201ENSMUST00000157236 63 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm24787-201ENSMUST00000157380 123 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm26482-201ENSMUST00000158015 62 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm17113-201ENSMUST00000170118 171 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm24512-201ENSMUST00000174963 65 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm23966-201ENSMUST00000179823 107 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm27470-201ENSMUST00000184070 210 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm28282-201ENSMUST00000186072 186 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm37007-201ENSMUST00000194234 319 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm22249-201ENSMUST00000082485 136 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm22979-201ENSMUST00000082609 159 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Gm23247-201ENSMUST00000083373 107 ntBASIC3.1□□□□□ -1.91
Usp4P35123 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.1□□□□□ -1.91
Usp4P35123 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
Usp4P35123 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Usp4P35123 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp4P35123 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp4P35123 Gm24283-201ENSMUST00000104233 107 ntBASIC3.09□□□□□ -1.91
Usp4P35123 Gm22713-201ENSMUST00000116895 130 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms