Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm23558-201ENSMUST00000157823 80 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm23196-201ENSMUST00000158806 107 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm17062-201ENSMUST00000166987 461 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm28408-201ENSMUST00000191557 463 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm37313-201ENSMUST00000191673 290 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm32033-201ENSMUST00000193483 339 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm43402-201ENSMUST00000197159 159 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm10298-201ENSMUST00000074801 265 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm23345-201ENSMUST00000083817 150 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Gm22866-201ENSMUST00000083947 177 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 Mir496a-201ENSMUST00000093627 79 ntBASIC1.69□□□□□ -2.14
Col2a1P28481 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col2a1P28481 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm26500-201ENSMUST00000101867 106 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm13457-201ENSMUST00000117885 267 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm13711-201ENSMUST00000119708 453 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm14551-201ENSMUST00000120802 256 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm12924-201ENSMUST00000121747 318 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm23214-201ENSMUST00000122716 157 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm6956-201ENSMUST00000134724 546 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm23329-201ENSMUST00000157415 108 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col2a1P28481 Gm28000-201ENSMUST00000184380 85 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm28995-201ENSMUST00000186625 261 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm42925-201ENSMUST00000197359 285 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.68□□□□□ -2.14
Col2a1P28481 Gm44419-201ENSMUST00000203338 229 ntBASIC1.68□□□□□ -2.14
Col2a1P28481 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col2a1P28481 Gm22658-201ENSMUST00000104196 155 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm16242-201ENSMUST00000117741 334 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm14980-201ENSMUST00000121247 736 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col2a1P28481 Gm25054-201ENSMUST00000157370 97 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm26400-201ENSMUST00000175012 85 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm22242-201ENSMUST00000175224 118 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Mir3098-201ENSMUST00000175416 87 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm24862-201ENSMUST00000179103 79 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm23310-201ENSMUST00000179105 79 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm25461-201ENSMUST00000179293 79 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm23003-201ENSMUST00000179948 107 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm27656-201ENSMUST00000185055 80 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm5329-201ENSMUST00000186898 463 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.67□□□□□ -2.14
Col2a1P28481 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Mir343-201ENSMUST00000102360 75 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm22021-201ENSMUST00000104353 107 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm11798-201ENSMUST00000119150 421 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm14837-201ENSMUST00000119688 206 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm23713-201ENSMUST00000157353 70 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm23559-201ENSMUST00000157824 103 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm22615-201ENSMUST00000158102 70 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm23760-201ENSMUST00000158350 116 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm23340-201ENSMUST00000158955 123 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm24813-201ENSMUST00000175310 84 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm23190-201ENSMUST00000180307 64 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Col2a1P28481 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm44373-201ENSMUST00000196112 169 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm9402-201ENSMUST00000196849 388 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Mir3970-201ENSMUST00000199287 90 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm45119-201ENSMUST00000207612 199 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm45315-201ENSMUST00000209283 333 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm45403-201ENSMUST00000209453 276 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm5023-201ENSMUST00000217442 587 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.66□□□□□ -2.14
Col2a1P28481 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Col2a1P28481 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.65□□□□□ -2.14
Col2a1P28481 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.65□□□□□ -2.14
Col2a1P28481 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.65□□□□□ -2.14
Col2a1P28481 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.65□□□□□ -2.14
Col2a1P28481 Gm26154-201ENSMUST00000102339 96 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Col2a1P28481 Gm14215-201ENSMUST00000120578 221 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm13396-201ENSMUST00000120617 271 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm23829-201ENSMUST00000157392 270 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm23752-201ENSMUST00000157584 115 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm22945-201ENSMUST00000158557 157 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm24085-201ENSMUST00000175172 116 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Mir5624-201ENSMUST00000176635 61 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
Col2a1P28481 Gm7329-201ENSMUST00000185915 210 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm44476-201ENSMUST00000196225 91 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm44063-201ENSMUST00000203307 376 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.65□□□□□ -2.15
Col2a1P28481 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm26327-201ENSMUST00000093724 111 ntBASIC1.65□□□□□ -2.15
Col2a1P28481 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.64□□□□□ -2.15
Col2a1P28481 Mir1942-201ENSMUST00000157274 63 ntBASIC1.64□□□□□ -2.15
Col2a1P28481 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms