Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm24505-201ENSMUST00000157682 126 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm23084-201ENSMUST00000157850 114 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm23895-201ENSMUST00000158108 160 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm25369-201ENSMUST00000158848 132 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm20693-201ENSMUST00000177431 211 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Mir6370-201ENSMUST00000183510 120 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm27580-201ENSMUST00000183666 149 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm29535-201ENSMUST00000185723 109 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm28143-201ENSMUST00000191082 109 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm44887-201ENSMUST00000208980 178 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.5□□□□□ -1.85
Hoxd9P28357 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm22454-201ENSMUST00000082583 107 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.5□□□□□ -1.85
Hoxd9P28357 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Hoxd9P28357 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Hoxd9P28357 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Hoxd9P28357 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hoxd9P28357 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hoxd9P28357 Snord14c-201ENSMUST00000101927 86 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm8244-201ENSMUST00000121254 264 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm28650-201ENSMUST00000188413 411 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm4036-201ENSMUST00000220842 626 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Mir201-201ENSMUST00000083470 66 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Mir208a-201ENSMUST00000083498 83 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Hoxd9P28357 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.49□□□□□ -1.85
Hoxd9P28357 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hoxd9P28357 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Hoxd9P28357 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Hoxd9P28357 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Hoxd9P28357 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Hoxd9P28357 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm26140-201ENSMUST00000103807 110 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm24581-201ENSMUST00000103962 133 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm23175-201ENSMUST00000104371 132 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm6079-201ENSMUST00000121356 404 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm24244-201ENSMUST00000157317 130 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm22515-201ENSMUST00000158273 305 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm22011-201ENSMUST00000158790 123 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm27392-201ENSMUST00000185041 101 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm43155-201ENSMUST00000202661 494 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm44256-201ENSMUST00000203304 335 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.48□□□□□ -1.85
Hoxd9P28357 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Hoxd9P28357 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Hoxd9P28357 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.48□□□□□ -1.85
Hoxd9P28357 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Hoxd9P28357 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Hoxd9P28357 Snord100-201ENSMUST00000116836 74 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm22790-201ENSMUST00000157229 129 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm23540-201ENSMUST00000157543 164 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm22840-201ENSMUST00000158444 136 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Mir1936-201ENSMUST00000158699 93 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Mir6385-201ENSMUST00000184295 105 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Mir6371-201ENSMUST00000184470 111 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.47□□□□□ -1.85
Hoxd9P28357 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm22443-201ENSMUST00000082890 107 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Hoxd9P28357 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.47□□□□□ -1.85
Hoxd9P28357 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
Hoxd9P28357 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
Hoxd9P28357 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm15069-201ENSMUST00000117792 192 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm15068-201ENSMUST00000119796 192 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm25105-201ENSMUST00000122477 130 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm26253-201ENSMUST00000122493 103 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm25882-201ENSMUST00000157784 85 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm25066-201ENSMUST00000158145 123 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm25367-201ENSMUST00000158846 106 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm20399-201ENSMUST00000174652 132 ntBASIC3.46□□□□□ -1.86
Hoxd9P28357 Gm43217-201ENSMUST00000199513 367 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms