Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm22559-201ENSMUST00000157329 134 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm23390-201ENSMUST00000157393 106 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm22665-201ENSMUST00000158720 275 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm24668-201ENSMUST00000158935 104 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm43993-201ENSMUST00000203972 247 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm45403-201ENSMUST00000209453 276 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Gm23731-201ENSMUST00000083749 107 ntBASIC1.2□□□□□ -2.22
Sdc1P18828 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Sdc1P18828 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
Sdc1P18828 Gm23907-201ENSMUST00000104595 189 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Gm25253-201ENSMUST00000179958 107 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Mir7675-201ENSMUST00000184262 58 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
Sdc1P18828 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.19□□□□□ -2.22
Sdc1P18828 Mir378a-201ENSMUST00000198300 66 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Gm10092-201ENSMUST00000077110 180 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Gm25357-201ENSMUST00000082745 72 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Gm22683-201ENSMUST00000082854 137 ntBASIC1.19□□□□□ -2.22
Sdc1P18828 Gm11512-201ENSMUST00000119669 663 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm25491-201ENSMUST00000158733 308 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Traj60-201ENSMUST00000167781 54 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm24366-201ENSMUST00000175383 86 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm26435-201ENSMUST00000179026 107 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm27817-201ENSMUST00000184302 233 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm27421-201ENSMUST00000184729 167 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm29613-201ENSMUST00000185846 313 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm29544-201ENSMUST00000188860 313 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm28808-201ENSMUST00000190978 313 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm44483-201ENSMUST00000197203 97 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Gm45207-201ENSMUST00000207469 145 ntBASIC1.18□□□□□ -2.22
Sdc1P18828 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
Sdc1P18828 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Sdc1P18828 Gm9059-201ENSMUST00000118319 183 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm11862-201ENSMUST00000119678 659 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm15529-201ENSMUST00000121833 994 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm24005-201ENSMUST00000158459 296 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm17148-201ENSMUST00000164702 249 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm27313-201ENSMUST00000183500 142 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm38395-201ENSMUST00000199904 830 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm44181-201ENSMUST00000203106 483 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Snord68-201ENSMUST00000082516 86 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 Gm23097-201ENSMUST00000083448 105 ntBASIC1.17□□□□□ -2.22
Sdc1P18828 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Snord98-201ENSMUST00000116819 65 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm14803-201ENSMUST00000117163 361 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm13475-201ENSMUST00000119290 234 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm14269-201ENSMUST00000120455 306 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm13720-201ENSMUST00000120741 196 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm16584-201ENSMUST00000159267 189 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm24510-201ENSMUST00000174965 94 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm24085-201ENSMUST00000175172 116 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Sdc1P18828 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Sdc1P18828 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Sdc1P18828 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Snord7-201ENSMUST00000083781 97 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.16□□□□□ -2.22
Sdc1P18828 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Sdc1P18828 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Sdc1P18828 Gm6444-201ENSMUST00000119611 458 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm14392-201ENSMUST00000120332 401 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm14413-201ENSMUST00000122158 408 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Mir1936-201ENSMUST00000158699 93 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm25486-201ENSMUST00000158726 63 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm23339-201ENSMUST00000158962 139 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm17052-201ENSMUST00000165496 289 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm25642-201ENSMUST00000175137 66 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Mir5118-201ENSMUST00000175551 67 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm26430-201ENSMUST00000178054 107 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm22264-201ENSMUST00000178200 107 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Mir6917-201ENSMUST00000184111 61 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Sdc1P18828 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.15□□□□□ -2.23
Sdc1P18828 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.15□□□□□ -2.23
Sdc1P18828 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.15□□□□□ -2.23
Sdc1P18828 Gm21937-201ENSMUST00000222825 218 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Mir322-201ENSMUST00000083484 95 ntBASIC1.15□□□□□ -2.23
Sdc1P18828 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.15□□□□□ -2.23
Sdc1P18828 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
Sdc1P18828 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm12309-201ENSMUST00000119889 182 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm14287-201ENSMUST00000121060 117 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm23016-201ENSMUST00000158431 62 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm22663-201ENSMUST00000158721 102 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Mir7068-201ENSMUST00000183439 74 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28110-201ENSMUST00000185782 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29057-201ENSMUST00000186468 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29661-201ENSMUST00000186781 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28737-201ENSMUST00000186808 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29147-201ENSMUST00000186846 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29118-201ENSMUST00000186908 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm28433-201ENSMUST00000187085 315 ntBASIC1.14□□□□□ -2.23
Sdc1P18828 Gm29227-201ENSMUST00000187139 315 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms