Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col1a1P11087 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm23733-201ENSMUST00000083750 106 ntBASIC0.36□□□□□ -2.35
Col1a1P11087 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Col1a1P11087 Gm23836-201ENSMUST00000104434 129 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm15175-201ENSMUST00000117629 132 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm23829-201ENSMUST00000157392 270 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm23754-201ENSMUST00000157576 63 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm24668-201ENSMUST00000158935 104 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.35□□□□□ -2.35
Col1a1P11087 Gm16404-201ENSMUST00000177739 468 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm7958-201ENSMUST00000178255 468 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
Col1a1P11087 Gm7950-201ENSMUST00000179633 468 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm14598-201ENSMUST00000180109 468 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm14625-201ENSMUST00000180231 468 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Mir191-201ENSMUST00000196210 74 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm18696-201ENSMUST00000220103 274 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm9795-201ENSMUST00000062156 693 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm24836-201ENSMUST00000122609 108 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm14364-201ENSMUST00000129209 267 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm24401-201ENSMUST00000157868 91 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm23419-201ENSMUST00000175523 84 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.35□□□□□ -2.35
Col1a1P11087 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.35□□□□□ -2.35
Col1a1P11087 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.35□□□□□ -2.35
Col1a1P11087 Gm29490-201ENSMUST00000190923 342 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm42570-201ENSMUST00000195937 292 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm43035-201ENSMUST00000197626 517 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm45912-201ENSMUST00000210646 543 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Col1a1P11087 Gm25851-201ENSMUST00000082794 107 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 Gm24254-201ENSMUST00000083702 104 ntBASIC0.35□□□□□ -2.35
Col1a1P11087 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.34□□□□□ -2.35
Col1a1P11087 Gm24892-201ENSMUST00000122747 104 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm22765-201ENSMUST00000158371 128 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Rnu7-201ENSMUST00000158458 62 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.34□□□□□ -2.36
Col1a1P11087 Gm24080-201ENSMUST00000175178 232 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28110-201ENSMUST00000185782 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29057-201ENSMUST00000186468 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28737-201ENSMUST00000186808 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29147-201ENSMUST00000186846 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29118-201ENSMUST00000186908 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28433-201ENSMUST00000187085 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29227-201ENSMUST00000187139 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28759-201ENSMUST00000187621 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28831-201ENSMUST00000187739 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29034-201ENSMUST00000188099 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28752-201ENSMUST00000188340 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28474-201ENSMUST00000188501 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28569-201ENSMUST00000188748 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28120-201ENSMUST00000188812 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28369-201ENSMUST00000188993 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28537-201ENSMUST00000189026 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28861-201ENSMUST00000189681 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28717-201ENSMUST00000189950 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29180-201ENSMUST00000190003 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29575-201ENSMUST00000190597 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29631-201ENSMUST00000191065 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm28160-201ENSMUST00000191229 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm29469-201ENSMUST00000191448 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm37658-201ENSMUST00000192672 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm37129-201ENSMUST00000195791 315 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm44326-201ENSMUST00000198226 101 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm25138-201ENSMUST00000083248 136 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm23462-201ENSMUST00000083264 104 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Gm24610-201ENSMUST00000083270 109 ntBASIC0.34□□□□□ -2.36
Col1a1P11087 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.33□□□□□ -2.36
Col1a1P11087 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Col1a1P11087 Gm14568-201ENSMUST00000119321 294 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm22962-201ENSMUST00000157962 73 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm23317-201ENSMUST00000157999 129 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm25011-201ENSMUST00000158398 126 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.33□□□□□ -2.36
Col1a1P11087 Gm4076-201ENSMUST00000179230 965 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Col1a1P11087 Gm25120-201ENSMUST00000180148 79 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm26968-201ENSMUST00000182894 481 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Mir6364-201ENSMUST00000183396 86 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm27420-201ENSMUST00000183823 79 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm36956-201ENSMUST00000193830 214 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Col1a1P11087 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm25589-201ENSMUST00000082502 166 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm25357-201ENSMUST00000082745 72 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm25578-201ENSMUST00000083406 104 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Gm23104-201ENSMUST00000083722 104 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 Mir362-201ENSMUST00000093592 65 ntBASIC0.33□□□□□ -2.36
Col1a1P11087 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms