Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm20613-201ENSMUST00000175828 345 ntBASIC1.21□□□□□ -2.22
P04940 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
P04940 Gm36953-201ENSMUST00000195295 268 ntBASIC1.21□□□□□ -2.22
P04940 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.21□□□□□ -2.22
P04940 Gm18617-201ENSMUST00000222311 259 ntBASIC1.21□□□□□ -2.22
P04940 Gm24412-201ENSMUST00000083426 109 ntBASIC1.21□□□□□ -2.22
P04940 Mir340-201ENSMUST00000083483 98 ntBASIC1.21□□□□□ -2.22
P04940 Mir107-201ENSMUST00000083660 87 ntBASIC1.21□□□□□ -2.22
P04940 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
P04940 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
P04940 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.21□□□□□ -2.22
P04940 Gm23010-201ENSMUST00000104151 126 ntBASIC1.2□□□□□ -2.22
P04940 Gm11786-201ENSMUST00000120799 155 ntBASIC1.2□□□□□ -2.22
P04940 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.2□□□□□ -2.22
P04940 Gm23983-201ENSMUST00000157142 114 ntBASIC1.2□□□□□ -2.22
P04940 Gm22963-201ENSMUST00000157960 91 ntBASIC1.2□□□□□ -2.22
P04940 Gm27265-201ENSMUST00000183559 77 ntBASIC1.2□□□□□ -2.22
P04940 Gm10105-201ENSMUST00000184601 270 ntBASIC1.2□□□□□ -2.22
P04940 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
P04940 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.2□□□□□ -2.22
P04940 Gm29005-201ENSMUST00000186773 320 ntBASIC1.2□□□□□ -2.22
P04940 Gm28925-201ENSMUST00000188586 168 ntBASIC1.2□□□□□ -2.22
P04940 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
P04940 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.2□□□□□ -2.22
P04940 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.2□□□□□ -2.22
P04940 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
P04940 Mir301-201ENSMUST00000083655 86 ntBASIC1.2□□□□□ -2.22
P04940 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.19□□□□□ -2.22
P04940 Gm12351-201ENSMUST00000118727 292 ntBASIC1.19□□□□□ -2.22
P04940 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.19□□□□□ -2.22
P04940 Gm13396-201ENSMUST00000120617 271 ntBASIC1.19□□□□□ -2.22
P04940 Gm6956-201ENSMUST00000134724 546 ntBASIC1.19□□□□□ -2.22
P04940 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.19□□□□□ -2.22
P04940 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
P04940 Gm23435-201ENSMUST00000157183 156 ntBASIC1.19□□□□□ -2.22
P04940 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.19□□□□□ -2.22
P04940 Gm26194-201ENSMUST00000175036 71 ntBASIC1.19□□□□□ -2.22
P04940 Gm25994-201ENSMUST00000175392 101 ntBASIC1.19□□□□□ -2.22
P04940 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
P04940 Mir7017-201ENSMUST00000184894 62 ntBASIC1.19□□□□□ -2.22
P04940 Gm29657-201ENSMUST00000189807 342 ntBASIC1.19□□□□□ -2.22
P04940 Gm28848-201ENSMUST00000189984 168 ntBASIC1.19□□□□□ -2.22
P04940 Gm19901-201ENSMUST00000192191 495 ntBASIC1.19□□□□□ -2.22
P04940 Gm43472-201ENSMUST00000200175 154 ntBASIC1.19□□□□□ -2.22
P04940 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
P04940 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.19□□□□□ -2.22
P04940 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.19□□□□□ -2.22
P04940 Snord68-201ENSMUST00000082516 86 ntBASIC1.19□□□□□ -2.22
P04940 Mir151-201ENSMUST00000083678 68 ntBASIC1.19□□□□□ -2.22
P04940 Snora33-201ENSMUST00000093556 129 ntBASIC1.19□□□□□ -2.22
P04940 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
P04940 Gm23951-201ENSMUST00000104029 132 ntBASIC1.18□□□□□ -2.22
P04940 Gm25421-201ENSMUST00000104218 164 ntBASIC1.18□□□□□ -2.22
P04940 Gm14296-202ENSMUST00000108931 750 ntBASIC1.18□□□□□ -2.22
P04940 Gm22193-201ENSMUST00000116868 76 ntBASIC1.18□□□□□ -2.22
P04940 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.18□□□□□ -2.22
P04940 Gm23120-201ENSMUST00000157654 287 ntBASIC1.18□□□□□ -2.22
P04940 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.18□□□□□ -2.22
P04940 Gm17113-201ENSMUST00000170118 171 ntBASIC1.18□□□□□ -2.22
P04940 Gm20462-201ENSMUST00000172623 408 ntBASIC1.18□□□□□ -2.22
P04940 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.18□□□□□ -2.22
P04940 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.18□□□□□ -2.22
P04940 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.18□□□□□ -2.22
P04940 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.18□□□□□ -2.22
P04940 Gm33866-201ENSMUST00000196911 289 ntBASIC1.18□□□□□ -2.22
P04940 Gm42960-201ENSMUST00000202160 241 ntBASIC1.18□□□□□ -2.22
P04940 Gm44149-201ENSMUST00000204256 226 ntBASIC1.18□□□□□ -2.22
P04940 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.18□□□□□ -2.22
P04940 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.18□□□□□ -2.22
P04940 Gm5023-201ENSMUST00000217442 587 ntBASIC1.18□□□□□ -2.22
P04940 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.18□□□□□ -2.22
P04940 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.18□□□□□ -2.22
P04940 Gm24977-201ENSMUST00000083106 163 ntBASIC1.18□□□□□ -2.22
P04940 Gm23041-201ENSMUST00000083868 106 ntBASIC1.18□□□□□ -2.22
P04940 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.18□□□□□ -2.22
P04940 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
P04940 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
P04940 Gm26500-201ENSMUST00000101867 106 ntBASIC1.17□□□□□ -2.22
P04940 Gm25992-201ENSMUST00000102437 109 ntBASIC1.17□□□□□ -2.22
P04940 Gm14803-201ENSMUST00000117163 361 ntBASIC1.17□□□□□ -2.22
P04940 Gm25970-201ENSMUST00000157165 86 ntBASIC1.17□□□□□ -2.22
P04940 Mir1949-201ENSMUST00000157434 141 ntBASIC1.17□□□□□ -2.22
P04940 Gm23558-201ENSMUST00000157823 80 ntBASIC1.17□□□□□ -2.22
P04940 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.17□□□□□ -2.22
P04940 Gm27410-201ENSMUST00000183851 115 ntBASIC1.17□□□□□ -2.22
P04940 Mir7093-201ENSMUST00000184195 101 ntBASIC1.17□□□□□ -2.22
P04940 Mir7241-201ENSMUST00000184532 64 ntBASIC1.17□□□□□ -2.22
P04940 Gm18357-201ENSMUST00000188184 580 ntBASIC1.17□□□□□ -2.22
P04940 Gm28414-201ENSMUST00000190111 294 ntBASIC1.17□□□□□ -2.22
P04940 Gm37162-201ENSMUST00000191708 551 ntBASIC1.17□□□□□ -2.22
P04940 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
P04940 Gm26265-202ENSMUST00000196326 133 ntBASIC1.17□□□□□ -2.22
P04940 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.17□□□□□ -2.22
P04940 Snord43-201ENSMUST00000199549 108 ntBASIC1.17□□□□□ -2.22
P04940 Gm16976-205ENSMUST00000227324 226 ntBASIC1.17□□□□□ -2.22
P04940 Gm22299-201ENSMUST00000082663 136 ntBASIC1.17□□□□□ -2.22
P04940 Gm23721-201ENSMUST00000083005 107 ntBASIC1.17□□□□□ -2.22
P04940 Gm22972-201ENSMUST00000083297 131 ntBASIC1.17□□□□□ -2.22
P04940 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.17□□□□□ -2.22
P04940 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms