Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm29026-201ENSMUST00000187787 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm28797-201ENSMUST00000188543 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm28855-201ENSMUST00000188680 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm28705-201ENSMUST00000189548 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm28939-201ENSMUST00000190351 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm28223-201ENSMUST00000190469 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm29092-201ENSMUST00000190768 315 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm37029-201ENSMUST00000195773 239 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.29□□□□□ -2.2
Col5a1O88207 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm17990-201ENSMUST00000211728 553 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Col5a1O88207 Gm24151-201ENSMUST00000082758 141 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm25475-201ENSMUST00000082825 180 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm24252-201ENSMUST00000083700 132 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Col5a1O88207 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Col5a1O88207 Gm23991-201ENSMUST00000117033 93 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm12837-201ENSMUST00000120131 373 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm14980-201ENSMUST00000121247 736 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm24504-201ENSMUST00000157679 100 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm25397-201ENSMUST00000176951 92 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm44373-201ENSMUST00000196112 169 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Gm23378-201ENSMUST00000082942 107 ntBASIC1.29□□□□□ -2.2
Col5a1O88207 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.29□□□□□ -2.2
Col5a1O88207 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Col5a1O88207 Mir3096-201ENSMUST00000116685 71 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm14761-201ENSMUST00000121363 262 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm24959-201ENSMUST00000157924 146 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm25162-201ENSMUST00000158906 159 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Col5a1O88207 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.28□□□□□ -2.2
Col5a1O88207 Gm23370-202ENSMUST00000197008 129 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm43035-201ENSMUST00000197626 517 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm43510-201ENSMUST00000197922 353 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm44419-201ENSMUST00000203338 229 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm44654-201ENSMUST00000208052 329 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Col5a1O88207 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.28□□□□□ -2.2
Col5a1O88207 Gm26457-201ENSMUST00000082678 78 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm23851-201ENSMUST00000083831 103 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.28□□□□□ -2.2
Col5a1O88207 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm13806-201ENSMUST00000117822 325 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm24839-201ENSMUST00000122602 107 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm2830-201ENSMUST00000140330 385 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm22037-201ENSMUST00000157280 296 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm22598-201ENSMUST00000157600 127 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm26029-201ENSMUST00000158659 132 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm23196-201ENSMUST00000158806 107 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm24084-201ENSMUST00000175173 137 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm21978-201ENSMUST00000179696 377 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm27410-201ENSMUST00000183851 115 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm28000-201ENSMUST00000184380 85 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm10105-201ENSMUST00000184601 270 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm28408-201ENSMUST00000191557 463 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm44409-201ENSMUST00000198810 166 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm45815-201ENSMUST00000220241 146 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm24037-201ENSMUST00000082871 180 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Gm23721-201ENSMUST00000083005 107 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Col5a1O88207 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.27□□□□□ -2.21
Col5a1O88207 AA413626-201ENSMUST00000121125 494 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm14709-201ENSMUST00000121225 304 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm25107-201ENSMUST00000122472 129 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24481-201ENSMUST00000157210 102 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Mir1942-201ENSMUST00000157274 63 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm22963-201ENSMUST00000157960 91 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm25121-201ENSMUST00000179846 79 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm29231-201ENSMUST00000179850 319 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.26□□□□□ -2.21
Col5a1O88207 Mir6371-201ENSMUST00000184470 111 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm28740-201ENSMUST00000186142 215 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm43976-201ENSMUST00000203637 235 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm44687-201ENSMUST00000204975 235 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm33654-201ENSMUST00000221704 215 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.26□□□□□ -2.21
Col5a1O88207 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col5a1O88207 Gm24460-201ENSMUST00000082731 106 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Mir221-201ENSMUST00000083488 95 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm25896-201ENSMUST00000083713 136 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm26164-201ENSMUST00000083793 104 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
Col5a1O88207 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Col5a1O88207 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.26□□□□□ -2.21
Col5a1O88207 Gm25781-201ENSMUST00000122527 84 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms