Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24365-201ENSMUST00000175384 125 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm44310-201ENSMUST00000175424 126 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm22639-201ENSMUST00000175591 125 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm25020-201ENSMUST00000178071 107 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm17522-201ENSMUST00000178144 498 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm24979-201ENSMUST00000178626 126 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm4479-201ENSMUST00000178807 171 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Mir6385-201ENSMUST00000184295 105 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm27743-201ENSMUST00000185136 126 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm25204-201ENSMUST00000082843 106 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm10351-201ENSMUST00000087694 125 ntBASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
Pcdh1F7BJK1 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm22148-201ENSMUST00000104445 107 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm15282-201ENSMUST00000117707 300 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm12458-201ENSMUST00000119387 495 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm12897-201ENSMUST00000120341 250 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm15861-201ENSMUST00000120979 339 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm22553-201ENSMUST00000157797 295 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm22382-201ENSMUST00000158185 130 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm25267-201ENSMUST00000158522 63 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm24054-201ENSMUST00000158619 105 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm17161-201ENSMUST00000169187 524 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm37097-201ENSMUST00000193676 336 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm43676-201ENSMUST00000197532 540 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm44338-201ENSMUST00000198614 110 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm24705-201ENSMUST00000082808 107 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Gm23138-201ENSMUST00000083365 103 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Mir193a-201ENSMUST00000083461 66 ntBASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Pcdh1F7BJK1 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.9□□□□□ -1.94
Pcdh1F7BJK1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
Pcdh1F7BJK1 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.9□□□□□ -1.94
Pcdh1F7BJK1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Mir1298-201ENSMUST00000116681 98 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm11253-201ENSMUST00000118486 201 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm26020-201ENSMUST00000122729 183 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm23101-201ENSMUST00000157550 137 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm22557-201ENSMUST00000157804 102 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm22349-201ENSMUST00000157864 107 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm24553-201ENSMUST00000158653 131 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm26022-201ENSMUST00000158663 108 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm23182-201ENSMUST00000158688 135 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm22139-201ENSMUST00000158747 105 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm26141-201ENSMUST00000175299 126 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm25253-201ENSMUST00000179958 107 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm29603-201ENSMUST00000186792 334 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm29308-201ENSMUST00000188863 315 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm28537-201ENSMUST00000189026 315 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm29631-201ENSMUST00000191065 315 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm43899-201ENSMUST00000203675 246 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm45245-201ENSMUST00000210082 376 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm5010-201ENSMUST00000213131 260 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Gm25589-201ENSMUST00000082502 166 ntBASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Pcdh1F7BJK1 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm22658-201ENSMUST00000104196 155 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm11356-201ENSMUST00000118974 192 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm25059-201ENSMUST00000157367 117 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm26405-201ENSMUST00000158495 100 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm38311-201ENSMUST00000192945 165 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm42988-201ENSMUST00000198116 225 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm24148-201ENSMUST00000082762 80 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm23247-201ENSMUST00000083373 107 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Gm22739-201ENSMUST00000083437 160 ntBASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Pcdh1F7BJK1 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms