Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm22731-201ENSMUST00000158086 94 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Gm23186-201ENSMUST00000180078 107 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Mir7678-201ENSMUST00000185076 71 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Gm18357-201ENSMUST00000188184 580 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Gm19901-201ENSMUST00000192191 495 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Mir3961-201ENSMUST00000198795 59 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Gm22972-201ENSMUST00000083297 131 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Gm24412-201ENSMUST00000083426 109 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Mir301-201ENSMUST00000083655 86 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Srp54bE9PXC0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Srp54bE9PXC0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm15067-201ENSMUST00000119534 156 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Mir1949-201ENSMUST00000157434 141 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm24478-201ENSMUST00000157439 158 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm25994-201ENSMUST00000175392 101 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Mir6352-201ENSMUST00000184495 116 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm27979-201ENSMUST00000185126 56 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm29005-201ENSMUST00000186773 320 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm28211-201ENSMUST00000190920 315 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm43427-201ENSMUST00000198188 331 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Mir1291-201ENSMUST00000199842 117 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm34783-201ENSMUST00000209159 303 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.87□□□□□ -2.11
Srp54bE9PXC0 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm24165-201ENSMUST00000082718 128 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Snora34-201ENSMUST00000083402 138 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.87□□□□□ -2.11
Srp54bE9PXC0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm14296-202ENSMUST00000108931 750 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm11798-201ENSMUST00000119150 421 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm14709-201ENSMUST00000121225 304 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm23435-201ENSMUST00000157183 156 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm26024-201ENSMUST00000158657 322 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Mir3086-201ENSMUST00000175072 87 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm27722-201ENSMUST00000183908 76 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm28995-201ENSMUST00000186625 261 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm7654-201ENSMUST00000186738 683 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm37399-201ENSMUST00000195224 416 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm44010-201ENSMUST00000204432 331 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm22299-201ENSMUST00000082663 136 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm23242-201ENSMUST00000083055 107 ntBASIC1.86□□□□□ -2.11
Srp54bE9PXC0 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Mir872-201ENSMUST00000104728 81 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm42606-201ENSMUST00000114209 239 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm22193-201ENSMUST00000116868 76 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm14972-201ENSMUST00000121780 364 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 U6.1-201ENSMUST00000157443 101 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm24348-201ENSMUST00000158710 130 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm22263-201ENSMUST00000180060 104 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm25813-201ENSMUST00000082748 191 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.85□□□□□ -2.11
Srp54bE9PXC0 Mir374b-201ENSMUST00000102314 95 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Gm14803-201ENSMUST00000117163 361 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Gm23289-201ENSMUST00000175615 108 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Gm24308-201ENSMUST00000177773 114 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Mir7679-201ENSMUST00000183379 63 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Gm18546-201ENSMUST00000197245 676 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Gm44938-201ENSMUST00000208614 427 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Srp54bE9PXC0 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Mir429-201ENSMUST00000083493 83 ntBASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Srp54bE9PXC0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Srp54bE9PXC0 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.84□□□□□ -2.12
Srp54bE9PXC0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.83□□□□□ -2.12
Srp54bE9PXC0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Srp54bE9PXC0 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.83□□□□□ -2.12
Srp54bE9PXC0 Gm22768-201ENSMUST00000158366 153 ntBASIC1.83□□□□□ -2.12
Srp54bE9PXC0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms