Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm37658-201ENSMUST00000192672 315 ntBASIC-0.11□□□□□ -2.43
Col6a3E9PWQ3 Gm37129-201ENSMUST00000195791 315 ntBASIC-0.11□□□□□ -2.43
Col6a3E9PWQ3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC-0.11□□□□□ -2.43
Col6a3E9PWQ3 Gm23727-201ENSMUST00000083352 164 ntBASIC-0.11□□□□□ -2.43
Col6a3E9PWQ3 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm28435-201ENSMUST00000185496 108 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 AC157017.2-201ENSMUST00000218354 777 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm26175-201ENSMUST00000083794 131 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm22004-201ENSMUST00000101884 107 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm13731-201ENSMUST00000117332 196 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm14795-201ENSMUST00000118461 471 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm9156-201ENSMUST00000189660 463 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 AL929285.1-201ENSMUST00000215522 229 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm24919-201ENSMUST00000083020 106 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm22829-201ENSMUST00000083771 106 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm23130-201ENSMUST00000104252 74 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm23956-201ENSMUST00000157211 119 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm25020-201ENSMUST00000178071 107 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm37934-201ENSMUST00000192902 402 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.12□□□□□ -2.43
Col6a3E9PWQ3 Gm22755-201ENSMUST00000157143 100 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm24060-201ENSMUST00000157494 95 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm25332-201ENSMUST00000158038 105 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm24056-201ENSMUST00000158617 146 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Mir3961-201ENSMUST00000198795 59 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm43171-201ENSMUST00000199882 291 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm44961-201ENSMUST00000207450 196 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm14774-201ENSMUST00000117857 536 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC-0.13□□□□□ -2.43
Col6a3E9PWQ3 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm20477-201ENSMUST00000174028 280 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm45541-201ENSMUST00000210443 54 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm45689-201ENSMUST00000210522 133 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm25663-201ENSMUST00000157698 135 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm23104-201ENSMUST00000083722 104 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm24716-201ENSMUST00000157524 104 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC-0.14□□□□□ -2.43
Col6a3E9PWQ3 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm18410-201ENSMUST00000207199 577 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 AC165092.3-201ENSMUST00000223602 282 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm26914-201ENSMUST00000182262 223 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm18160-201ENSMUST00000214279 827 ntBASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.15□□□□□ -2.43
Col6a3E9PWQ3 Gm24598-201ENSMUST00000122510 74 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Mir5104-201ENSMUST00000175319 94 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm27545-201ENSMUST00000184755 202 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm38149-201ENSMUST00000191943 339 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm44615-201ENSMUST00000206548 358 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm26206-201ENSMUST00000082908 110 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 AC124426.1-203ENSMUST00000221814 1362 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm15223-201ENSMUST00000120989 826 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm22027-201ENSMUST00000122737 127 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm23114-201ENSMUST00000158478 117 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 AC167202.1-201ENSMUST00000219027 331 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm24948-201ENSMUST00000082866 207 ntBASIC-0.16□□□□□ -2.43
Col6a3E9PWQ3 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC-0.16□□□□□ -2.44
Col6a3E9PWQ3 Gm14629-201ENSMUST00000122428 144 ntBASIC-0.16□□□□□ -2.44
Col6a3E9PWQ3 Mir3079-201ENSMUST00000175428 90 ntBASIC-0.16□□□□□ -2.44
Col6a3E9PWQ3 Gm25297-201ENSMUST00000175490 67 ntBASIC-0.16□□□□□ -2.44
Col6a3E9PWQ3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC-0.16□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms