Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm24725-201ENSMUST00000158229 125 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm43602-201ENSMUST00000196772 300 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm43035-201ENSMUST00000197626 517 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 AC154562.1-201ENSMUST00000226140 966 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm12143-201ENSMUST00000119666 332 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm25663-201ENSMUST00000157698 135 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm24997-201ENSMUST00000157910 105 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Chd6A3KFM7 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm37193-201ENSMUST00000193087 513 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm42719-201ENSMUST00000197393 355 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm45704-201ENSMUST00000212582 403 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.03□□□□□ -2.4
Chd6A3KFM7 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm15176-201ENSMUST00000117734 135 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm12392-201ENSMUST00000118014 938 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm12806-201ENSMUST00000119384 268 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm13396-201ENSMUST00000120617 271 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm22765-201ENSMUST00000158371 128 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Mir7667-201ENSMUST00000183866 63 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm37089-201ENSMUST00000195616 129 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm18747-201ENSMUST00000198129 648 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm44404-201ENSMUST00000203979 636 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm45438-201ENSMUST00000210242 564 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm22886-201ENSMUST00000093714 107 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm11065-201ENSMUST00000111462 228 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm12771-201ENSMUST00000120246 135 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm15365-201ENSMUST00000122392 300 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm25557-201ENSMUST00000158084 315 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm25241-201ENSMUST00000174909 84 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm23419-201ENSMUST00000175523 84 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm22801-201ENSMUST00000175624 84 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm23370-202ENSMUST00000197008 129 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm45878-201ENSMUST00000211839 241 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC0.02□□□□□ -2.41
Chd6A3KFM7 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.02□□□□□ -2.41
Chd6A3KFM7 AC132446.1-201ENSMUST00000222655 226 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Snord85-201ENSMUST00000083262 73 ntBASIC0.02□□□□□ -2.41
Chd6A3KFM7 Gm37693-201ENSMUST00000194562 234 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm24149-201ENSMUST00000082757 107 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm26081-201ENSMUST00000104068 132 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm22960-201ENSMUST00000122517 104 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm25243-201ENSMUST00000174912 207 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm21744-201ENSMUST00000178403 662 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm26189-201ENSMUST00000179879 107 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm44954-201ENSMUST00000208513 227 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm22265-201ENSMUST00000082947 116 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Snord33-201ENSMUST00000083694 84 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Olfr575-201ENSMUST00000084812 957 ntBASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Chd6A3KFM7 Gm14554-201ENSMUST00000119548 661 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm15177-201ENSMUST00000120491 577 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm24480-201ENSMUST00000157442 103 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm22098-201ENSMUST00000157930 85 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm26405-201ENSMUST00000158495 100 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm24823-201ENSMUST00000175092 91 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Mir15a-201ENSMUST00000175266 84 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm25933-201ENSMUST00000178943 108 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0□□□□□ -2.41
Chd6A3KFM7 Gm36984-201ENSMUST00000192770 235 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm38109-201ENSMUST00000195386 181 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm44524-201ENSMUST00000203899 271 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm45912-201ENSMUST00000210646 543 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Mir411-201ENSMUST00000083543 82 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm14713-201ENSMUST00000122362 686 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Mir1899-201ENSMUST00000122798 96 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm24400-201ENSMUST00000157865 107 ntBASIC0□□□□□ -2.41
Chd6A3KFM7 Gm25643-201ENSMUST00000158874 103 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms