Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav12-1A0N8R1 Mir293-201ENSMUST00000104841 80 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22193-201ENSMUST00000116868 76 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm23991-201ENSMUST00000117033 93 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm12837-201ENSMUST00000120131 373 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25952-201ENSMUST00000175329 74 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22802-201ENSMUST00000175621 89 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm9830-201ENSMUST00000178509 357 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24713-201ENSMUST00000178850 107 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25448-201ENSMUST00000180065 107 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm34073-201ENSMUST00000195736 212 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm43529-201ENSMUST00000199178 412 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm44449-201ENSMUST00000203610 153 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm44609-201ENSMUST00000207157 460 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Mir224-201ENSMUST00000083608 82 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm23848-201ENSMUST00000083826 106 ntBASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm14887-201ENSMUST00000119522 663 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm14946-201ENSMUST00000119859 296 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm18396-201ENSMUST00000177095 361 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm37709-201ENSMUST00000195074 600 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm33654-201ENSMUST00000221704 215 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Snord95-201ENSMUST00000082846 68 ntBASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Trav12-1A0N8R1 Mir687-201ENSMUST00000102166 89 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm11792-201ENSMUST00000120640 168 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm11849-201ENSMUST00000121293 261 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm15914-201ENSMUST00000161922 309 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm25956-201ENSMUST00000175115 217 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0□□□□□ -2.41
Trav12-1A0N8R1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm22583-201ENSMUST00000178031 107 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm4076-201ENSMUST00000179230 965 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm37997-201ENSMUST00000193515 267 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm42855-201ENSMUST00000197388 253 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0□□□□□ -2.41
Trav12-1A0N8R1 AC125020.2-201ENSMUST00000218894 348 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 CT009713.9-201ENSMUST00000223604 389 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm26446-201ENSMUST00000082455 103 ntBASIC0□□□□□ -2.41
Trav12-1A0N8R1 Gm37630-201ENSMUST00000194210 1456 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm24481-201ENSMUST00000157210 102 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm23387-201ENSMUST00000158586 107 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Mir3079-201ENSMUST00000175428 90 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Mir3108-201ENSMUST00000175500 79 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm28408-201ENSMUST00000191557 463 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm42506-201ENSMUST00000202009 150 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 AC159621.1-201ENSMUST00000223249 163 ntBASIC-0.01□□□□□ -2.41
Trav12-1A0N8R1 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22003-201ENSMUST00000101885 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm15175-201ENSMUST00000117629 132 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm11859-201ENSMUST00000118099 455 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24540-201ENSMUST00000177627 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25256-201ENSMUST00000177746 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22822-201ENSMUST00000177941 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Rnu6-201ENSMUST00000178023 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24753-201ENSMUST00000178183 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25829-201ENSMUST00000178275 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22092-201ENSMUST00000178290 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24486-201ENSMUST00000178420 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm23217-201ENSMUST00000178482 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm23092-201ENSMUST00000178688 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm23269-201ENSMUST00000178701 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25709-201ENSMUST00000178844 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25547-201ENSMUST00000178877 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24722-201ENSMUST00000179017 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22969-201ENSMUST00000179018 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24873-201ENSMUST00000179101 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm23934-201ENSMUST00000179111 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22623-201ENSMUST00000179244 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25737-201ENSMUST00000179274 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22618-201ENSMUST00000179376 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24182-201ENSMUST00000179419 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24242-201ENSMUST00000179440 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24863-201ENSMUST00000179499 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm25064-201ENSMUST00000179535 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm26295-201ENSMUST00000179690 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22823-201ENSMUST00000179754 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22360-201ENSMUST00000179775 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24978-201ENSMUST00000179782 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24967-201ENSMUST00000179791 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm24267-201ENSMUST00000179841 107 ntBASIC-0.02□□□□□ -2.41
Trav12-1A0N8R1 Gm22288-201ENSMUST00000179904 107 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms