Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm10360-201ENSMUST00000097219 272 ntBASIC1.55□□□□□ -2.16
Upk3aQ9JKX8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Upk3aQ9JKX8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Upk3aQ9JKX8 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Upk3aQ9JKX8 Gm14269-201ENSMUST00000120455 306 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm24480-201ENSMUST00000157442 103 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm24419-201ENSMUST00000157875 332 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm24498-201ENSMUST00000158445 102 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Snord87-201ENSMUST00000175437 87 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm20613-201ENSMUST00000175828 345 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm22308-201ENSMUST00000177609 107 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm25589-201ENSMUST00000082502 166 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm22997-201ENSMUST00000082845 107 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm25896-201ENSMUST00000083713 136 ntBASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
Upk3aQ9JKX8 Gm25377-201ENSMUST00000104334 129 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Gm13714-201ENSMUST00000117313 221 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Gm23983-201ENSMUST00000157142 114 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Gm22316-201ENSMUST00000158012 216 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Mir6351-201ENSMUST00000183826 99 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Mir3569-201ENSMUST00000185080 58 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Gm38041-201ENSMUST00000194445 661 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Gm44482-201ENSMUST00000199232 103 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.53□□□□□ -2.16
Upk3aQ9JKX8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
Upk3aQ9JKX8 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Upk3aQ9JKX8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm15526-201ENSMUST00000112504 204 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Snord98-201ENSMUST00000116819 65 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm24598-201ENSMUST00000122510 74 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm25486-201ENSMUST00000158726 63 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm29005-201ENSMUST00000186773 320 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm44128-201ENSMUST00000204909 219 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Gm25579-201ENSMUST00000083407 106 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Mir429-201ENSMUST00000083493 83 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Mir320-201ENSMUST00000083594 82 ntBASIC1.52□□□□□ -2.17
Upk3aQ9JKX8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Mir701-201ENSMUST00000102208 109 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm23011-201ENSMUST00000104148 132 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm24282-201ENSMUST00000104232 66 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm24896-201ENSMUST00000122741 135 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm23169-201ENSMUST00000157157 112 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm27926-201ENSMUST00000157180 66 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm22338-201ENSMUST00000157715 129 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Mir7241-201ENSMUST00000184532 64 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm18357-201ENSMUST00000188184 580 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm37162-201ENSMUST00000191708 551 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm42622-201ENSMUST00000197229 355 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm44465-201ENSMUST00000199536 114 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm46312-201ENSMUST00000220961 420 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Gm24406-201ENSMUST00000083026 128 ntBASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Upk3aQ9JKX8 Mir223-201ENSMUST00000102112 110 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm15162-201ENSMUST00000119325 283 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm3027-201ENSMUST00000167579 451 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm28927-201ENSMUST00000191528 272 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm42960-201ENSMUST00000202160 241 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm45403-201ENSMUST00000209453 276 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.5□□□□□ -2.17
Upk3aQ9JKX8 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm22217-201ENSMUST00000157556 313 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm37128-201ENSMUST00000192599 232 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm38395-201ENSMUST00000199904 830 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm23614-201ENSMUST00000082598 107 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm25801-201ENSMUST00000082638 106 ntBASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Upk3aQ9JKX8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms