Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.78□□□□□ -2.12
Scn5aQ9JJV9 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.78□□□□□ -2.12
Scn5aQ9JJV9 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.78□□□□□ -2.12
Scn5aQ9JJV9 Gm24049-201ENSMUST00000102409 100 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm24172-201ENSMUST00000104127 117 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Mir743b-201ENSMUST00000104751 77 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 AA413626-201ENSMUST00000121125 494 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm26255-201ENSMUST00000122492 103 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm26430-201ENSMUST00000178054 107 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm23191-201ENSMUST00000179147 107 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm28740-201ENSMUST00000186142 215 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm18971-201ENSMUST00000197240 374 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm45315-201ENSMUST00000209283 333 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm21937-201ENSMUST00000222825 218 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm23404-201ENSMUST00000082543 97 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm23462-201ENSMUST00000083264 104 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Mir29c-201ENSMUST00000083614 88 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gm25207-201ENSMUST00000093745 107 ntBASIC1.78□□□□□ -2.13
Scn5aQ9JJV9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Gm23813-201ENSMUST00000175153 77 ntBASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Gm33654-201ENSMUST00000221704 215 ntBASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Scn5aQ9JJV9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm23987-201ENSMUST00000117039 129 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Mir7021-201ENSMUST00000197026 63 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm22364-201ENSMUST00000083097 98 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Mir320-201ENSMUST00000083594 82 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm24192-201ENSMUST00000157978 145 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm23024-201ENSMUST00000158770 292 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm22242-201ENSMUST00000175224 118 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm25020-201ENSMUST00000178071 107 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm21978-201ENSMUST00000179696 377 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm28579-201ENSMUST00000186143 369 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm19777-201ENSMUST00000191940 358 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Snord43-201ENSMUST00000199549 108 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Gm25929-201ENSMUST00000082784 107 ntBASIC1.76□□□□□ -2.13
Scn5aQ9JJV9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm22032-201ENSMUST00000116946 116 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm25625-201ENSMUST00000157221 96 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm25454-201ENSMUST00000157947 315 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Snord11-201ENSMUST00000158468 84 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm37557-201ENSMUST00000191640 139 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm44473-201ENSMUST00000204039 152 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm23406-201ENSMUST00000082537 122 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Gm22866-201ENSMUST00000083947 177 ntBASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Scn5aQ9JJV9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm6956-201ENSMUST00000134724 546 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Mir6370-201ENSMUST00000183510 120 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm27410-201ENSMUST00000183851 115 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Mir7667-201ENSMUST00000183866 63 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm9251-201ENSMUST00000197202 628 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm42739-201ENSMUST00000200687 226 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm45119-201ENSMUST00000207612 199 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm26066-201ENSMUST00000083385 109 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm25651-201ENSMUST00000083782 119 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm11606-201ENSMUST00000120706 617 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm23829-201ENSMUST00000157392 270 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm24724-201ENSMUST00000158230 107 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm25434-201ENSMUST00000158278 167 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm25711-201ENSMUST00000158633 128 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Mir3968-201ENSMUST00000175355 100 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm28661-201ENSMUST00000188231 681 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm29262-201ENSMUST00000190084 196 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm19123-201ENSMUST00000190716 651 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm37778-201ENSMUST00000191732 190 ntBASIC1.74□□□□□ -2.13
Scn5aQ9JJV9 Gm42925-201ENSMUST00000197359 285 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms